Notice: We have moved solgenomics to a new server and hosting system which caused some instability over the last few days. We apologize for any inconvenience.

EST details — SGN-E280303

Search information 
Request: 280303Match: SGN-E280303
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C72226Clone name: cLER-1-I23
cartOrder Clone
Library Name: cLEROrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: leaf
Development Stage: 4 weeks

Microarray: Alias clone SGN-C178575 is on microarray TOM1: SGN-S1-1-4.1.4.15
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C72226 [cLER-1-I23] Trace: SGN-T91858 EST: SGN-E280304 Direction: 3' Facility: TIGR
Clone: SGN-C178575 [TUS-29-I5] Trace: SGN-T183778 EST: SGN-E370437 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E280303Length: 333 bp (854 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E280303 [] (trimmed) TTTTTTACCTCTTGCCAGCGACACCGTTTAGCTACAAATGGCTGCAGCTACCTCTCTATACGTCTCCGAGATGCTCGGAAGTCCGGTCAAGTTTA
GCGGTGTTGCAAGGCCTGCTGCTCCATCTCCATCCTCCTCTGCTACCTTCAAAACTGTTGCCCTTTTCAAAAAGAAGGCGGCTGCAGCTCCTGCC
AAAGCTAAGGCTGCCGCTGTCTCCCCTGCTGACGATGAGCTCGCCAAGTGGTACGGACCTGACAGAAGAATTTTCCTGCCCGAGGGTCTATTGGA
CAGATCAGAAATCCCCGAGTACTTGAACGGAGAAGTTCCCGGAGACTA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E280303] SGN-U580870 Tomato 200607 Build 2 302 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T91857 [Download][View] Facility Assigned ID: TPRAA60TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.970 Expected Error Rate: 0.0165 Quality Trim Threshold: 14.5