EST details — SGN-E280283
| Search information |
| Request: 280283 | Match: SGN-E280283 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C72140 | Clone name: cLER-1-E21 |
| ||
| Library Name: cLER | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4 weeks
Microarray: Alias clone SGN-C178505 is on microarray TOM1: SGN-S1-1-2.2.4.14
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C72140 [cLER-1-E21] | Trace: SGN-T91838 | EST: SGN-E280284 | Direction: 3' | Facility: TIGR |
| Clone: SGN-C178505 [TUS-29-F7] | Trace: SGN-T184117 | EST: SGN-E371048 | Direction: 3' | Facility: INRA |
| Clone: SGN-C178505 [TUS-29-F7] | Trace: SGN-T184118 | EST: SGN-E371049 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E280283 | Length: 476 bp (870 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E280283 [] (trimmed)
ATATTTTGTGAGTATTTAATACGAAAGAAATAAAGATGGGATACTGGAAAGCAAAGGTTCTTCCAAAGATCAAGCAGATCTTTGATAAAAATGGA
CCCAAGAAAACTGCTGCTGCTGAGGCATGCAAGACTTTTGATCAAGCTAAGGAGGAATATAGCAAGGAGTTTGAAGAGAAGAAGACTGAGCTTCA
ACCCAAAGTTGTTGAAATTTATGAAGCTGCTGCAGTTGAGATCAAGAGCTTAGTGAAGGAACCAAAGGGTGCAGGGCTGAAGAAAAACTCAGATG
GGGTTCAGAAATTCCTTGATGACCTTGTCAAGATTGAATTTCCGGGATCAAAAGCTGTTAGCGAAGCAAGTTCAAACTTTGGGCCTTCCTATGTA
TCGGGCCCAATTATTTTTGTGTTCGAAAAAGTTTCCACTTTCATAGTCACAGAAGATAAGAAGGAAGAGGAACCCGCGGCTGCTGATGACGTGCA
T
CCCAAGAAAACTGCTGCTGCTGAGGCATGCAAGACTTTTGATCAAGCTAAGGAGGAATATAGCAAGGAGTTTGAAGAGAAGAAGACTGAGCTTCA
ACCCAAAGTTGTTGAAATTTATGAAGCTGCTGCAGTTGAGATCAAGAGCTTAGTGAAGGAACCAAAGGGTGCAGGGCTGAAGAAAAACTCAGATG
GGGTTCAGAAATTCCTTGATGACCTTGTCAAGATTGAATTTCCGGGATCAAAAGCTGTTAGCGAAGCAAGTTCAAACTTTGGGCCTTCCTATGTA
TCGGGCCCAATTATTTTTGTGTTCGAAAAAGTTTCCACTTTCATAGTCACAGAAGATAAGAAGGAAGAGGAACCCGCGGCTGCTGATGACGTGCA
T
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E280283] | SGN-U580472 | Tomato 200607 | Build 2 | 105 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T91837 [Download][View] | Facility Assigned ID: TPRAA35TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.939 | Expected Error Rate: 0.0066 | Quality Trim Threshold: 14.5 |
Working
