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EST details — SGN-C27977

Search information 
Request: 27977Match: SGN-C27977
Request From: SGN database generated linkMatch Type: cDNA clone internal identifier
Clone information 
SGN ID: SGN-C27977Clone name: cLEF-46-D13
cartOrder Clone
Library Name: cLEFOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: fruit pericarp
Development Stage: mature green

Microarray: Alias clone SGN-C176830 is on microarray TOM1: SGN-S1-1-5.4.9.17
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C176830 [TUS-24-P12] Trace: SGN-T197543 EST: SGN-E396217 Direction: 3' Facility: INRA
Clone: SGN-C176830 [TUS-24-P12] Trace: SGN-T197544 EST: SGN-E396218 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E247226Length: 420 bp (892 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E247226 [] (trimmed) GTTTCAAAAAGGTTTAGCTCATAAATTTAAGCAACCGTCTGGTACTGGCATTGATTTTTCAATGTTTGAAGAGGCAGAATTGTCCAAAGATAGTG
AGGCAGATGTGTATCCACTTGCAGTCAAGGCGGAGGCAACATTAGATAACCCAAGTGAATCAGAGGATGGAAGTGCAGCATCAGGATCCACTAAT
TCACAGATCACTCAAGCAGTTTTTGAGAAGGACAAAGGTGAGTACCATGTTAGGGCGGTGAAGCAGATCCTGTGGGTCAATGACATGAGGTATGA
ATTGCAAGAGATTTTTGGGATTGGTAATTCAGTTGAAAGTGACTTCGATGGAAATGATCCCGGAAAAGAATGTGTGATTTGCCTCTCTGAACCTC
GGGATACCACTGTACTTCCATGTCGGCACATGTGTATGTG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E247226] SGN-U565057 Tomato 200607 Build 2 34 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T61637 [Download][View] Facility Assigned ID: TMGHA19TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.950 Expected Error Rate: 0.0121 Quality Trim Threshold: 14.5