EST details — SGN-E279689
| Search information |
| Request: 279689 | Match: SGN-E279689 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C73549 | Clone name: cLER-5-D9 |
| ||
| Library Name: cLER | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4 weeks
Microarray: Alias clone SGN-C185324 is on microarray TOM1: SGN-S1-1-7.2.9.2
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C185324 [TUS-47-B10] | Trace: SGN-T192454 | EST: SGN-E391128 | Direction: 5' | Facility: INRA |
| Clone: SGN-C185324 [TUS-47-B10] | Trace: SGN-T197774 | EST: SGN-E396448 | Direction: 3' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E279689 | Length: 545 bp (848 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E279689 [] (trimmed)
GTTTCTCTCTCTTACCATAGCTCAGAAGCTCGACCATGGCCGTCGGTAAGAACAAGCGAATTTCCAAAGGCAAAAAAGGAGGGAAGAAGAAGGCA
GCTGATCCATATGCTAAAAAGGATTGGTATGATATCAAGGCTCCATCAGTATTTGGTGTCCGCAATGTAGGGAAGACCCTTGTTACCCGTACACA
GGGTACAAAGATTGCTTCAGAAGGCCTGAAGCATCGTGTGTTCGAAGTGTCATTGGCTGATCTTCAGAATGACGAAGATCACTCCTTCAGGAAGA
TTCGTCTGAGAGCTGAAGACGTCCAAGGAAGAAATGTCTTGACAAACTTTCACGGTATGGATTTCACCACAGATAAATTGAGGTCACTGGTAAAG
AAATGGCAATCATTGATTGAGGCTCATGTTGACGTTAAGACAACTGATAGCTACACCTTGAGAATGTTCTGCATTGGCTTTACCAAAAAGCGTCC
AAACCAACAAAAAAGAACCTGCTACGCGCAGTCAAGCCAGATTCGCCAGATTCGTCGCAAGATGCGTGAG
GCTGATCCATATGCTAAAAAGGATTGGTATGATATCAAGGCTCCATCAGTATTTGGTGTCCGCAATGTAGGGAAGACCCTTGTTACCCGTACACA
GGGTACAAAGATTGCTTCAGAAGGCCTGAAGCATCGTGTGTTCGAAGTGTCATTGGCTGATCTTCAGAATGACGAAGATCACTCCTTCAGGAAGA
TTCGTCTGAGAGCTGAAGACGTCCAAGGAAGAAATGTCTTGACAAACTTTCACGGTATGGATTTCACCACAGATAAATTGAGGTCACTGGTAAAG
AAATGGCAATCATTGATTGAGGCTCATGTTGACGTTAAGACAACTGATAGCTACACCTTGAGAATGTTCTGCATTGGCTTTACCAAAAAGCGTCC
AAACCAACAAAAAAGAACCTGCTACGCGCAGTCAAGCCAGATTCGCCAGATTCGTCGCAAGATGCGTGAG
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E279689] | SGN-U580590 | Tomato 200607 | Build 2 | 97 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T93198 [Download][View] | Facility Assigned ID: TPRAS17TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.974 | Expected Error Rate: 0.0073 | Quality Trim Threshold: 14.5 |
Working
