EST details — SGN-E279666
| Search information |
| Request: 279666 | Match: SGN-E279666 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C73633 | Clone name: cLER-5-I20 |
| ||
| Library Name: cLER | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4 weeks
Microarray: Alias clone SGN-C185943 is on microarray TOM1: SGN-S1-1-4.4.7.6
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C185943 [TUS-48-L5] | Trace: SGN-T192556 | EST: SGN-E391230 | Direction: 5' | Facility: INRA |
| Clone: SGN-C185943 [TUS-48-L5] | Trace: SGN-T192803 | EST: SGN-E391477 | Direction: 3' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E279666 | Length: 549 bp (885 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E279666 [] (trimmed)
AAAATCACATTTGATTTCTCAATTCTTGTTTCAGACCAATCAATCATGTCGTGCTGTGGAGGAAACTGTGGCTGTGGATCTAGCTGCAAGTGCGG
CAACGGCTGTGGAGGTTGCAAGATGTACCCAGACATGAGCTACACCGAAAGCAGCACAACCACTGAGACTTTGGTGCTTGGGGTGGGACCTGAGA
AGACAAGCTTCGGCGCCATGGAGATGGGTGAATCCCCTGTTGCTGAGAATGGCTGCAAATGTGGATCTGACTGCAAGTGCAACCCTTGCACTTGT
TCTAAGTGAACGAAAATATAGTTGAAACAGAGCAGAGATCATGGTGTTAGCCTTCTATGGCTGAAGAAAAATAGTTGAAAAAATGTGTGTGTCTA
GTGTTTTAGTGTGTCTGTCTGTTGAAAACAGGGAAAAAAATGTGTTCTTTTTTCCCTGTAATAAGAAATATAGTAATGGAGTCTTTATGTGTAAG
TAACCAGTAAAATGGTTTGTGTAAACATGAATATCTCTGCATCTGTTAATTTTAACATATAAGTTTGGATATGG
CAACGGCTGTGGAGGTTGCAAGATGTACCCAGACATGAGCTACACCGAAAGCAGCACAACCACTGAGACTTTGGTGCTTGGGGTGGGACCTGAGA
AGACAAGCTTCGGCGCCATGGAGATGGGTGAATCCCCTGTTGCTGAGAATGGCTGCAAATGTGGATCTGACTGCAAGTGCAACCCTTGCACTTGT
TCTAAGTGAACGAAAATATAGTTGAAACAGAGCAGAGATCATGGTGTTAGCCTTCTATGGCTGAAGAAAAATAGTTGAAAAAATGTGTGTGTCTA
GTGTTTTAGTGTGTCTGTCTGTTGAAAACAGGGAAAAAAATGTGTTCTTTTTTCCCTGTAATAAGAAATATAGTAATGGAGTCTTTATGTGTAAG
TAACCAGTAAAATGGTTTGTGTAAACATGAATATCTCTGCATCTGTTAATTTTAACATATAAGTTTGGATATGG
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E279666] | SGN-U579165 | Tomato 200607 | Build 2 | 283 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T93175 [Download][View] | Facility Assigned ID: TPRAR58TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.961 | Expected Error Rate: 0.0090 | Quality Trim Threshold: 12.5 |
Working
