EST details — SGN-E279642

Search information 
Request: 279642Match: SGN-E279642
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C73493Clone name: cLER-5-A4
cartOrder Clone
Library Name: cLEROrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: leaf
Development Stage: 4 weeks

Microarray: Alias clone SGN-C186045 is on microarray TOM1: SGN-S1-1-6.4.7.11
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C186045 [TUS-48-P11] Trace: SGN-T192819 EST: SGN-E391493 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E279642Length: 473 bp (861 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E279642 [] (trimmed) GTACGAAGTTTTGAACAAAAAAATAATAATTAAGAATGGGTTCCAAGGCAATTTTGTTTCTTGGTCTTTTTTTGGCTATTTTCTTAATGATAAGC
TCTGAGGTTGCAGCTAGGGAGTTGGCAGCTGAGACTACCAATGCGGTGAAATTGGATAACGAGAATGCAGTAAACGTCGATCATTATTATGGCAA
GGGCTATGGCAAACGTAAGAAATGTTACAGTTGCTGCAAAAAATACAAATATGGATGCAAAAAATACTGCTGCTCTTATGAAGAATATGTTGCTG
CCCAGACTCAAAACTAAATAATTAATTAGTGCTTAATTATGTGTATTTATTATTATTGTAAACTTTTGAAATTAAGTGACAAGATAATAATAATC
TTGCTACTTAATTAAGACCCTTTGCTTGTAACAAGTATGAATAAAGCCATTCATTTACGTACTATGAATGGTTGGTCATGATGTAATGTTTTG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E279642] SGN-U578947 Tomato 200607 Build 2 200 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T93151 [Download][View] Facility Assigned ID: TPRAR02TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.941 Expected Error Rate: 0.0125 Quality Trim Threshold: 14.5