EST details — SGN-E278767
| Search information |
| Request: 278767 | Match: SGN-E278767 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C72942 | Clone name: cLER-2-K4 |
| ||
| Library Name: cLER | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4 weeks
Microarray: Alias clone SGN-C185927 is on microarray TOM1: SGN-S1-1-4.3.7.10
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C185927 [TUS-48-K13] | Trace: SGN-T188190 | EST: SGN-E376150 | Direction: 3' | Facility: INRA |
| Clone: SGN-C185927 [TUS-48-K13] | Trace: SGN-T188191 | EST: SGN-E376151 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E278767 | Length: 539 bp (725 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E278767 [] (trimmed)
GTTTACAGCAATGGCTTCTTCAGTAATGTCCTCAGCAGCTGTTGCCACCCGCGGCAATGGTGCACAAGCTAGCATGGCTGCACCCTTCACTGGAC
TCAAGTCCACCGCTTCTTTCCCTGTTTCAAGGAAGCAAAACCTTGACATTACCTCCATTGCTAGCAACGGTGGAAGAGTCAGGTGCATGCAAGCG
TGGCCACCAATTAACATGAAGAAGTACGAGACTCTGACGTACCTTCCTGATTTGTCCGACGAGCAATCGCTCAGCGACATTGAGTACCTATTGAA
AGATGGATGGGATCCTTGCTTGGAATTCGAGACTGAGCACGGATTTGTGTACCGTGAGAACCATAAGTCACCAGGATACTACTATGGCAGATACT
GGACCATGTGGAAGATGCCCATGTTCGGGTGCACTGATGCAACCCAGGTCTTGGCTGAGGTGCACGAGGCAAAGAAGGCTTACCCACAGGCATGG
GTCCGTATCATCGGATTCGACAATGTTCGGCAAGTGCAGTGCATCAGCTTCATCGCTTACAAGC
TCAAGTCCACCGCTTCTTTCCCTGTTTCAAGGAAGCAAAACCTTGACATTACCTCCATTGCTAGCAACGGTGGAAGAGTCAGGTGCATGCAAGCG
TGGCCACCAATTAACATGAAGAAGTACGAGACTCTGACGTACCTTCCTGATTTGTCCGACGAGCAATCGCTCAGCGACATTGAGTACCTATTGAA
AGATGGATGGGATCCTTGCTTGGAATTCGAGACTGAGCACGGATTTGTGTACCGTGAGAACCATAAGTCACCAGGATACTACTATGGCAGATACT
GGACCATGTGGAAGATGCCCATGTTCGGGTGCACTGATGCAACCCAGGTCTTGGCTGAGGTGCACGAGGCAAAGAAGGCTTACCCACAGGCATGG
GTCCGTATCATCGGATTCGACAATGTTCGGCAAGTGCAGTGCATCAGCTTCATCGCTTACAAGC
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E278767] | SGN-U580869 | Tomato 200607 | Build 2 | 1124 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T92485 [Download][View] | Facility Assigned ID: TPRAF62TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.985 | Expected Error Rate: 0.0256 | Quality Trim Threshold: 14.5 |
Working
