EST details — SGN-E278640

Search information 
Request: 278640Match: SGN-E278640
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C69505Clone name: cLER-10-P8
cartOrder Clone
Library Name: cLEROrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: leaf
Development Stage: 4 weeks

Microarray: Alias clone SGN-C185987 is on microarray TOM1: SGN-S1-1-8.2.7.7
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C185987 [TUS-48-N1] Trace: SGN-T192563 EST: SGN-E391237 Direction: 3' Facility: INRA
Clone: SGN-C185987 [TUS-48-N1] Trace: SGN-T192564 EST: SGN-E391238 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E278640Length: 441 bp (732 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E278640 [] (trimmed) GTGACACTGAGAATAGATTGTGCTGAGAGATAAGGAGATTTCTTGTAGAGAGGAAAAAATTTGAAGTAAAGAAAAAGAAAATGGCCTCAGCATCT
CTACTAAAGTCATCCCCAGTTCTTGACAAATCTGAGTTTTTAAAGGGGCAAAGCCTTCGTCAGCCTTCTGTCTCAGTGGTCCGTTGTCATCCCAC
CAATGCTACTTCTCTTACTGTCCGCGCAGCTTCCTCTTATGCTGATGAGCTCATTAAAACCGCTAAAACTGTTGCATCACCAGGCCGTGGAATTT
TAGCCATGGATGAGTCGAATGCCACTTGTGGAAAGCGCTTGGCTTCCATTGGTTTGGAAAACACTGAGGCTAACCGCCAAGCGTACCGTACCTTG
CTGGTGTCAGCTCCAGGCCTTGGACAGTACATCTCTGGTGCTATTCTTTTTGAGGAGACCC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E278640] SGN-U581053 Tomato 200607 Build 2 312 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T94067 [Download][View] Facility Assigned ID: TPRBN88TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.971 Expected Error Rate: 0.0045 Quality Trim Threshold: 14.5