EST details — SGN-E278100
| Search information |
| Request: 278100 | Match: SGN-E278100 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C73407 | Clone name: cLER-4-K18 |
| ||
| Library Name: cLER | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4 weeks
Microarray: Alias clone SGN-C185318 is on microarray TOM1: SGN-S1-1-5.2.10.19
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C185318 [TUS-47-B4] | Trace: SGN-T192452 | EST: SGN-E391126 | Direction: 5' | Facility: INRA |
| Clone: SGN-C185318 [TUS-47-B4] | Trace: SGN-T192646 | EST: SGN-E391320 | Direction: 3' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E278100 | Length: 588 bp (768 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E278100 [] (trimmed)
CTCCTCTCAATTTTTCTCGAGCATAGAGATTTGATTTTTCATCAATGGCGGCTCTACAACAAACTCCGATAACTTTCCAATCCCGTTCACCGCCG
CCGACTCAACTCATCAACGGAACCGTCGCAAAGCTATCCTACTCCGGCGGTCTCAAGCTCCCAAAACTCACACTCAAACTCCGATCCAAACGCAC
CTCCCGCCGCGGCCGCGGCCGCGGTGTACTCGGCGCAAAAATGGCAGATTCCGCCGCCGGTAGCTACGCGAACGCTCTCGCCGACGTAGCTAAAT
CCAACGAAACACTAGAACAAACCACAGCAGATCTCGAAAAAATCGAGAAAATCTTCGACGACGATGCGGTTTACGATTTCTTCGTAAGTCCTATC
GTTAGCGAAGAGAAAAAACGTGAACTCGTCGACGAGATCGTTTCATCTACAGGCATTCAACCACACGTTGCAAATTTTCTCAACATCCTTGTTGA
TATGAAGAGAGTTGAATTAATCAAAGACATTGTTAAAGAGTTTGAGAAAGTTTACAATACCTTGACGGATACTGAACTTGCTGTAGTGACTTCAG
TGGTGAAACTGGAATCGC
CCGACTCAACTCATCAACGGAACCGTCGCAAAGCTATCCTACTCCGGCGGTCTCAAGCTCCCAAAACTCACACTCAAACTCCGATCCAAACGCAC
CTCCCGCCGCGGCCGCGGCCGCGGTGTACTCGGCGCAAAAATGGCAGATTCCGCCGCCGGTAGCTACGCGAACGCTCTCGCCGACGTAGCTAAAT
CCAACGAAACACTAGAACAAACCACAGCAGATCTCGAAAAAATCGAGAAAATCTTCGACGACGATGCGGTTTACGATTTCTTCGTAAGTCCTATC
GTTAGCGAAGAGAAAAAACGTGAACTCGTCGACGAGATCGTTTCATCTACAGGCATTCAACCACACGTTGCAAATTTTCTCAACATCCTTGTTGA
TATGAAGAGAGTTGAATTAATCAAAGACATTGTTAAAGAGTTTGAGAAAGTTTACAATACCTTGACGGATACTGAACTTGCTGTAGTGACTTCAG
TGGTGAAACTGGAATCGC
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E278100] | SGN-U583491 | Tomato 200607 | Build 2 | 82 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T92933 [Download][View] | Facility Assigned ID: TPRAN69TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.957 | Expected Error Rate: 0.0045 | Quality Trim Threshold: 14.5 |
Working
