EST details — SGN-E277433
| Search information |
| Request: 277433 | Match: SGN-E277433 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C73175 | Clone name: cLER-3-J21 |
| ||
| Library Name: cLER | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4 weeks
Microarray: Alias clone SGN-C185308 is on microarray TOM1: SGN-S1-1-7.1.9.6
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C185308 [TUS-47-A18] | Trace: SGN-T191922 | EST: SGN-E390596 | Direction: 3' | Facility: INRA |
| Clone: SGN-C185308 [TUS-47-A18] | Trace: SGN-T191923 | EST: SGN-E390597 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E277433 | Length: 532 bp (757 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E277433 [] (trimmed)
CTTGTGCCCCCCTTAATAGTGAAAATTTTCAATTGTTAATTTTCTCGTTAAAAATGCCGATCAACCAAATTACTATTGGAAGCCATGAGGAACTC
CGCCATCCCGGGGCGCTTAAAGCGGCCTTGGCGGAGTTCATCAGTACCCTGATCTTCGTATTCGCAGGTCAGGGTTCTGGTATGGCTTTCAATAA
GCTTACCGATGGCGTCGCTACTCCCGCTGGCCTTATTTCCGCCTCCATAGCACACGCCTTCGGGTTGTTCGTCGCCGTCTCCGTCGGTGCTAACA
TCTCCGGCGGCCACGTCAACCCTGCTGTTACCTTCGGTGCTTTTGTTGGTGGAAACATCACTTTGTTCCGTGGAATTTTGTACATCATTGCACAG
TTGCTTGGATCCACTGCTGCTTGCGCTCTCCTTGAATTCGCCACCGGTGGCATGAGCACGGGATCATTTGCATTGTCAGCCGGTGTATCAGTATG
GAACGCGTTCGTATTCGAGATTGTGATGACTTTCGGTCTCGTTTACACTGTTTACGC
CGCCATCCCGGGGCGCTTAAAGCGGCCTTGGCGGAGTTCATCAGTACCCTGATCTTCGTATTCGCAGGTCAGGGTTCTGGTATGGCTTTCAATAA
GCTTACCGATGGCGTCGCTACTCCCGCTGGCCTTATTTCCGCCTCCATAGCACACGCCTTCGGGTTGTTCGTCGCCGTCTCCGTCGGTGCTAACA
TCTCCGGCGGCCACGTCAACCCTGCTGTTACCTTCGGTGCTTTTGTTGGTGGAAACATCACTTTGTTCCGTGGAATTTTGTACATCATTGCACAG
TTGCTTGGATCCACTGCTGCTTGCGCTCTCCTTGAATTCGCCACCGGTGGCATGAGCACGGGATCATTTGCATTGTCAGCCGGTGTATCAGTATG
GAACGCGTTCGTATTCGAGATTGTGATGACTTTCGGTCTCGTTTACACTGTTTACGC
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E277433] | SGN-U581024 | Tomato 200607 | Build 2 | 145 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T92321 [Download][View] | Facility Assigned ID: TPRAK59THB |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.981 | Expected Error Rate: 0.0038 | Quality Trim Threshold: 14.5 |
Working
