EST details — SGN-E276790
| Search information |
| Request: 276790 | Match: SGN-E276790 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C66594 | Clone name: cLEN-14-M19 |
| ||
| Library Name: cLEN | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit pericarp
Development Stage: red ripe to over-ripe
Microarray: Alias clone SGN-C181001 is on microarray TOM1: SGN-S1-1-2.2.17.13
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C181001 [TUS-35-N7] | Trace: SGN-T196417 | EST: SGN-E395091 | Direction: 5' | Facility: INRA |
| Clone: SGN-C181001 [TUS-35-N7] | Trace: SGN-T197727 | EST: SGN-E396401 | Direction: 3' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E276790 | Length: 487 bp (746 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E276790 [] (trimmed)
TTAAGGACTGCCAATGCTTGCCTATCTCGTTATTCTTCTCATCATCGGACTTTTTCTGCGCTTCCGAATTTTGCCCCTGATGATAAGCAAAGCAC
CAACTCGTTTGAGTCTGCTGAGGACTTTGAAAGACGAATTTTTGGTGATAGTGCGGGTAACAGGCCAAGTCCAAACTCCTTTTTCAGAAAGCTTG
ATGACGCTGAAAAGTCTTATGATAGATCTGGTCTGGGCTCCACATTTAGTTCTGGAAACAGATCTAGTATCCTTGATGGTCTAGATGAGAGTTTT
AATACATTATCAGATGGGATGGATGGTAAGCTGAAGGAAGCAGCCAGCTATTTTCAGGTGGATCCTGAAGAAGTAGGAAAAGAAGATTATGCTTA
CAGAGCAGATATGACCTTTTGGCCCGGAAACACTTATGAACTCAAGGATCTTGATCTTAGAAAACCAGGAGTTCGCAGGCCCCCAAAAAGGGATG
AATTTGAAACTA
CAACTCGTTTGAGTCTGCTGAGGACTTTGAAAGACGAATTTTTGGTGATAGTGCGGGTAACAGGCCAAGTCCAAACTCCTTTTTCAGAAAGCTTG
ATGACGCTGAAAAGTCTTATGATAGATCTGGTCTGGGCTCCACATTTAGTTCTGGAAACAGATCTAGTATCCTTGATGGTCTAGATGAGAGTTTT
AATACATTATCAGATGGGATGGATGGTAAGCTGAAGGAAGCAGCCAGCTATTTTCAGGTGGATCCTGAAGAAGTAGGAAAAGAAGATTATGCTTA
CAGAGCAGATATGACCTTTTGGCCCGGAAACACTTATGAACTCAAGGATCTTGATCTTAGAAAACCAGGAGTTCGCAGGCCCCCAAAAAGGGATG
AATTTGAAACTA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E276790] | SGN-U571977 | Tomato 200607 | Build 2 | 3 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T90336 [Download][View] | Facility Assigned ID: TRRCA82TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.971 | Expected Error Rate: 0.0088 | Quality Trim Threshold: 14.5 |
Working
