EST details — SGN-C27525

Search information 
Request: 27525Match: SGN-C27525
Request From: SGN database generated linkMatch Type: cDNA clone internal identifier
Clone information 
SGN ID: SGN-C27525Clone name: cLEF-44-F22
cartOrder Clone
Library Name: cLEFOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: fruit pericarp
Development Stage: mature green

Microarray: Alias clone SGN-C180593 is on microarray TOM1: SGN-S1-1-2.1.19.7
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C180593 [TUS-34-M7] Trace: SGN-T193732 EST: SGN-E392406 Direction: 3' Facility: INRA
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Sequence 
Sequence Id: SGN-E245336Length: 530 bp (1007 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E245336 [] (trimmed) CGAGAAACTAAGTGGTTGTTTGCTGCCGTCTACATATGTAACAGGTGAGTAGCTTTGGCTCAATCCTATCATGTGGCTGGACTGTTATGCAATTG
ATTTTGGTTCTATAATTGAGGGGTTATCTAATGCCATTTTTTGTTGGAGACGTAGTCACTGGTTGACACTGCTTTTTTATAGGAGAAAGTTATTT
GACTTATGAAATGAATTGCTTTTACATGTGAATCTTTCGTCGTAGGAAATATTATTGCATTGCATGGAAAAGAAACTAGTGCAGGTGAATTTTTT
GTTGAAGATGCTCTAGAGGCTGGCCTACCACAACAGATAGAGCAGCCAATTCAACTAGGTGAAGATAAATATGTGGTTTTCATCTCTGGTTTGAG
TGTTGGAAGAAGCTCTTCTAATCCTCTCCAATTTCAACTTTTAGTTGATCACATTACTGGACATTTAGGAGATGAGAAGGAACAAAATATTGCAG
CTCAAATAGTTCAAGTTGTTATTGCTGGAAACTCTGTTGAAGTTCCTCATGGACT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E245336] SGN-U568661 Tomato 200607 Build 2 41 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T61197 [Download][View] Facility Assigned ID: TMGGT35TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.951 Expected Error Rate: 0.0129 Quality Trim Threshold: 14.5