EST details — SGN-E274513
| Search information |
| Request: 274513 | Match: SGN-E274513 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C65822 | Clone name: cLEN-11-J7 |
| ||
| Library Name: cLEN | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit pericarp
Development Stage: red ripe to over-ripe
Microarray: Alias clone SGN-C184595 is on microarray TOM1: SGN-S1-1-8.4.14.7
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C184595 [TUS-45-D1] | Trace: SGN-T198654 | EST: SGN-E397328 | Direction: 3' | Facility: INRA |
| Clone: SGN-C184595 [TUS-45-D1] | Trace: SGN-T198655 | EST: SGN-E397329 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E274513 | Length: 615 bp (976 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E274513 [] (trimmed)
ATATTTTATTTCATTTCACACACAAAAAAATTGAATTCAAATTATTGATTAGCAAAAAATGGGAGAGGAAAAATCTGTGATGGTAGTTGGATTAG
AAGATAATCAACATAGTTTTTATGCATTAGAATGGACTTTGGATCATTTTTTTACAAATTATAATTCTAATTCTCCTTTTAAACTTGTTATTCTT
CATGCTAAACCTACTCCTGCTTCTGTCATTGGTCTTGCTGTTGGTCCTGGGAGTGTGGAAGCTTTTTCAGCCATAGAGTCTAATTTAAAGAAAAT
TGCTGCAAGGGTTGTGGAAAAAGCTAAGGAGATATGCAAAGAAAAATCTGTAATTTATTATTATTATCATTATTAAAACAATGATTTTTTTAAAA
AAAAAAGGTTTAAAAAAATCATTTTTACGTAGTGATTTGATATTTTTGTACTATTTTGTAGGTGAATGATGTTGTAGTTGAGATAGTGGAAGGTG
ATGCTAGGCATGTCCTTTGTGAAGCTGTAGAGAAACTTCATGCCTCTGTTTTAGTTGTTGGTTGTCATGGTTATGGAGTTATAAAGAGGTAAATT
TAATTTATATACGTTCACAGTATAAATAGCTTGGTTATATTTCTA
AAGATAATCAACATAGTTTTTATGCATTAGAATGGACTTTGGATCATTTTTTTACAAATTATAATTCTAATTCTCCTTTTAAACTTGTTATTCTT
CATGCTAAACCTACTCCTGCTTCTGTCATTGGTCTTGCTGTTGGTCCTGGGAGTGTGGAAGCTTTTTCAGCCATAGAGTCTAATTTAAAGAAAAT
TGCTGCAAGGGTTGTGGAAAAAGCTAAGGAGATATGCAAAGAAAAATCTGTAATTTATTATTATTATCATTATTAAAACAATGATTTTTTTAAAA
AAAAAAGGTTTAAAAAAATCATTTTTACGTAGTGATTTGATATTTTTGTACTATTTTGTAGGTGAATGATGTTGTAGTTGAGATAGTGGAAGGTG
ATGCTAGGCATGTCCTTTGTGAAGCTGTAGAGAAACTTCATGCCTCTGTTTTAGTTGTTGGTTGTCATGGTTATGGAGTTATAAAGAGGTAAATT
TAATTTATATACGTTCACAGTATAAATAGCTTGGTTATATTTCTA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E274513] | SGN-U590569 | Tomato 200607 | Build 2 | 1 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T89540 [Download][View] | Facility Assigned ID: TRRBQ52TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.916 | Expected Error Rate: 0.0077 | Quality Trim Threshold: 14.5 |
Working
