EST details — SGN-E274280
| Search information |
| Request: 274280 | Match: SGN-E274280 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C66696 | Clone name: cLEN-15-D22 |
| ||
| Library Name: cLEN | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit pericarp
Development Stage: red ripe to over-ripe
Microarray: Alias clone SGN-C181011 is on microarray TOM1: SGN-S1-1-8.2.17.21
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C181011 [TUS-35-N17] | Trace: SGN-T196420 | EST: SGN-E395094 | Direction: 5' | Facility: INRA |
| Clone: SGN-C181011 [TUS-35-N17] | Trace: SGN-T197730 | EST: SGN-E396404 | Direction: 3' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E274280 | Length: 494 bp (891 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E274280 [] (trimmed)
CTTTTTTAGTACAGGATCTTGGCATCAATGCACTTCACATCAAGCTTCGAGCCACTGGTGGAAACAAGACCAAAACACCTGGACCTGGTGCTCAG
TCTGCTCTCAGGGCTCTTGCTCGTTCAGGAATGAAAATTGGTCGTATAGGTAATGATTAGCTTTTGTGTGTCAGCTAAGCCTTGTGAGAAACACT
TCAATGTTGATGATCACATAACTTTGTAAATTATCTTGCAGAGGACGTGACTCCAATTCCTACTGATAGCACTCGCAGAAAGGGTGGTAGGAGAG
GACGAAGGCTGTAAGGCTGCTTGCTTCTCTTGTCAAGAAGGAGATGCAGGTTCTTGTTGAGAATGCTGCAGGTGTTATTTGTGATATGGACTTGA
ATCTTATTCACCTCTACTATGTAGATCTACTGATGTGGGCTTTGCCTATAAATCTTGCTTCTTATTTCGCGGTTAAATGTGTGAAACAATTATGA
GAAATATGAATTTTAGCCT
TCTGCTCTCAGGGCTCTTGCTCGTTCAGGAATGAAAATTGGTCGTATAGGTAATGATTAGCTTTTGTGTGTCAGCTAAGCCTTGTGAGAAACACT
TCAATGTTGATGATCACATAACTTTGTAAATTATCTTGCAGAGGACGTGACTCCAATTCCTACTGATAGCACTCGCAGAAAGGGTGGTAGGAGAG
GACGAAGGCTGTAAGGCTGCTTGCTTCTCTTGTCAAGAAGGAGATGCAGGTTCTTGTTGAGAATGCTGCAGGTGTTATTTGTGATATGGACTTGA
ATCTTATTCACCTCTACTATGTAGATCTACTGATGTGGGCTTTGCCTATAAATCTTGCTTCTTATTTCGCGGTTAAATGTGTGAAACAATTATGA
GAAATATGAATTTTAGCCT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E274280] | SGN-U578272 | Tomato 200607 | Build 2 | 4 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T90515 [Download][View] | Facility Assigned ID: TRRCH23THH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.967 | Expected Error Rate: 0.0213 | Quality Trim Threshold: 12.5 |
Working
