EST details — SGN-E273532
| Search information |
| Request: 273532 | Match: SGN-E273532 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C68525 | Clone name: cLEN-6-M11 |
| ||
| Library Name: cLEN | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit pericarp
Development Stage: red ripe to over-ripe
Microarray: Alias clone SGN-C183626 is on microarray TOM1: SGN-S1-1-1.3.1.4
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C183626 [TUS-42-K16] | Trace: SGN-T195050 | EST: SGN-E393724 | Direction: 5' | Facility: INRA |
| Clone: SGN-C183626 [TUS-42-K16] | Trace: SGN-T195050 | EST: SGN-E399295 | Direction: 5' | Facility: INRA |
| Clone: SGN-C183626 [TUS-42-K16] | Trace: SGN-T195051 | EST: SGN-E393725 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E273532 | Length: 610 bp (844 bp untrimmed) |
| Status: Current Version | Direction: 5' |
>SGN-E273532 [] (trimmed)
ATCTTCTCCGCCCTAAATCCCAGTTCTCAATTCTTCTCCATCAATGGCTTCCACCTTAGCTTCCTCTGTTATTTCCAAGACTAATTTCATTGACA
CACACAAATCATCCTTCTATGGCGTTCCAATTTCATCACAAACTCGATTGAAAATCGTTAAATCGACTCCACAAAACATGTCTGTTTCCATGTCT
GCTGATGCTTCTCCTCCTTACGATCTCGGAAGTTTCAGTTTTAATCCGATTAAGGAATCGATTGTTGCTCGCGAAATGACTCGGAGGTATATGAC
GGATATGATTACTTATGCTGATACTGATGTTGTCATTGTTGGTGCTGGATCTGCTGGTTTATCTTGTGCTTATGAACTCAGCAAGAACCCTAATG
TTCAGGTGGCTATTCTTGAGCAATCTGTGAGCCCTGGTGGAGGTGCTTGGCTAGGTGGACAACTCTTCTCTGCTATGGTTGTGCGTAAGCCAGCA
CATCTTTTCTTGAACGAGCTAGGCATTGACTACGACGAGCAAGACAACTACGTGGTCATCAAACACGCTGCCTTGTTCACCTCAACCATCATGAG
CAAGCTTTTGGCCAGGCCAAATGTGAAGCTCTTCAATGCT
CACACAAATCATCCTTCTATGGCGTTCCAATTTCATCACAAACTCGATTGAAAATCGTTAAATCGACTCCACAAAACATGTCTGTTTCCATGTCT
GCTGATGCTTCTCCTCCTTACGATCTCGGAAGTTTCAGTTTTAATCCGATTAAGGAATCGATTGTTGCTCGCGAAATGACTCGGAGGTATATGAC
GGATATGATTACTTATGCTGATACTGATGTTGTCATTGTTGGTGCTGGATCTGCTGGTTTATCTTGTGCTTATGAACTCAGCAAGAACCCTAATG
TTCAGGTGGCTATTCTTGAGCAATCTGTGAGCCCTGGTGGAGGTGCTTGGCTAGGTGGACAACTCTTCTCTGCTATGGTTGTGCGTAAGCCAGCA
CATCTTTTCTTGAACGAGCTAGGCATTGACTACGACGAGCAAGACAACTACGTGGTCATCAAACACGCTGCCTTGTTCACCTCAACCATCATGAG
CAAGCTTTTGGCCAGGCCAAATGTGAAGCTCTTCAATGCT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E273532] | SGN-U580030 | Tomato 200607 | Build 2 | 241 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T88228 [Download][View] | Facility Assigned ID: TRRAU78TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.974 | Expected Error Rate: 0.0044 | Quality Trim Threshold: 14.5 |
Working
