EST details — SGN-E273464
| Search information |
| Request: 273464 | Match: SGN-E273464 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C68223 | Clone name: cLEN-3-L21 |
| ||
| Library Name: cLEN | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit pericarp
Development Stage: red ripe to over-ripe
Microarray: Alias clone SGN-C180994 is on microarray TOM1: SGN-S1-1-1.1.17.21
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C180994 [TUS-35-M24] | Trace: SGN-T193655 | EST: SGN-E392329 | Direction: 5' | Facility: INRA |
| Clone: SGN-C180994 [TUS-35-M24] | Trace: SGN-T199234 | EST: SGN-E397908 | Direction: 3' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E273464 | Length: 716 bp (917 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E273464 [] (trimmed)
CAGACCCCGGGGAGATAGAATCTTCTCAGCTCCCAGATGACGATAAGAATGATGAAGTTGATGCGACAGAAGAGCTAGCTGAAAGTTCTGAGAAG
TTGAATGATGGTGGTGACCAGGTTGCTGCAGAAACTGATCAGGCTCTGGATACTGTTACTGGTGAGAAACCATCAAGCAGTCCAGTTGATAGTAG
CAATTCAAAAGAAGGGGGTCTGGATGAAAGTGCTGCTGCTGAAACAGAAGAAGGGAAACAGGTTTCACCTATCAATAGGAGCTCAAGAACTATAA
ACCTAAATGAGAGGGCTAGAGAAAGGGCTTCCATTAGGCAAGCTGCTATGCTTTCCGCTACACCAGCAAGAGGCCGTGGGCGAGTTCTTCGAGGT
CGCAGTGGGCGCAGTGGTCGTGGTGGGCGCGGTCCAAACTCTGGTTCACAGGGTTAATCATTTTCACCATCACATTCCATTCATGTTATCTTCTG
ATATCACTGATATTAATTCATCTTGAAGACTCTTCATGCTACTGCTCGGTCATGTCACGACATTCATCTTCCAATTATTCTAGGGTAAAAAAGAG
TTGACTGTTGTCGAAGGAAATCAATTATGAAGTCTTGACAAGTTTCTTTGAATTTCTTCTGTTTTGGAAACTCAAGTTTCGATGACGTTCTTGCT
TTTGTGATGAAACTCAACCTTGATGAGATGTTCTTGCTTTTCTGATGACCA
TTGAATGATGGTGGTGACCAGGTTGCTGCAGAAACTGATCAGGCTCTGGATACTGTTACTGGTGAGAAACCATCAAGCAGTCCAGTTGATAGTAG
CAATTCAAAAGAAGGGGGTCTGGATGAAAGTGCTGCTGCTGAAACAGAAGAAGGGAAACAGGTTTCACCTATCAATAGGAGCTCAAGAACTATAA
ACCTAAATGAGAGGGCTAGAGAAAGGGCTTCCATTAGGCAAGCTGCTATGCTTTCCGCTACACCAGCAAGAGGCCGTGGGCGAGTTCTTCGAGGT
CGCAGTGGGCGCAGTGGTCGTGGTGGGCGCGGTCCAAACTCTGGTTCACAGGGTTAATCATTTTCACCATCACATTCCATTCATGTTATCTTCTG
ATATCACTGATATTAATTCATCTTGAAGACTCTTCATGCTACTGCTCGGTCATGTCACGACATTCATCTTCCAATTATTCTAGGGTAAAAAAGAG
TTGACTGTTGTCGAAGGAAATCAATTATGAAGTCTTGACAAGTTTCTTTGAATTTCTTCTGTTTTGGAAACTCAAGTTTCGATGACGTTCTTGCT
TTTGTGATGAAACTCAACCTTGATGAGATGTTCTTGCTTTTCTGATGACCA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E273464] | SGN-U574398 | Tomato 200607 | Build 2 | 15 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T88060 [Download][View] | Facility Assigned ID: TRRAK71TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.980 | Expected Error Rate: 0.0061 | Quality Trim Threshold: 14.5 |
Working
