EST details — SGN-E272403
| Search information |
| Request: 272403 | Match: SGN-E272403 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C61853 | Clone name: cLEM-19-K4 |
| ||
| Library Name: cLEM | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit
Development Stage: immature green fruit
Microarray: Alias clone SGN-C183142 is on microarray TOM1: SGN-S1-1-5.3.3.9
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C183142 [TUS-41-G12] | Trace: SGN-T196503 | EST: SGN-E395177 | Direction: 5' | Facility: INRA |
| Clone: SGN-C183142 [TUS-41-G12] | Trace: SGN-T199462 | EST: SGN-E398136 | Direction: 3' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E272403 | Length: 431 bp (808 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E272403 [] (trimmed)
GAGCAATAGCCAAATACCAAGCTGATCATGCCATCCCTGGCATGAACGAGGGGTCTAATCCAGTTGGTCCTACCCCTCACACCTTGCAGGAGCTG
CAAGATACCACCCTTGGTTCGTTATTATCAGCTTTGATGCAGCACTGTGATCCTCCTCAGAGAAGATTTCCATTGGAGAAAGGTGTTCCACCACC
ATGGTGGCCCACAGGAAAGGAGGATTGGTGGCCTCAATTGGGTTTGCAGAAGGACCAAGGTTCTCTACCTTACAAGAAGCCTCATGATCTGAAGA
AGGCGTGGAAGGTTGGTGTCCTAACAGCGGTGATCAAGCACATGTTCCCTGATATTGCTAAAATCCGCAAGCTGGTAAGGCAGTCAAAGTGCTTA
CAGGACAAGATGACAGCCAAGGAAAGTGCAACTTGGCTTGCCATCATCAGT
CAAGATACCACCCTTGGTTCGTTATTATCAGCTTTGATGCAGCACTGTGATCCTCCTCAGAGAAGATTTCCATTGGAGAAAGGTGTTCCACCACC
ATGGTGGCCCACAGGAAAGGAGGATTGGTGGCCTCAATTGGGTTTGCAGAAGGACCAAGGTTCTCTACCTTACAAGAAGCCTCATGATCTGAAGA
AGGCGTGGAAGGTTGGTGTCCTAACAGCGGTGATCAAGCACATGTTCCCTGATATTGCTAAAATCCGCAAGCTGGTAAGGCAGTCAAAGTGCTTA
CAGGACAAGATGACAGCCAAGGAAAGTGCAACTTGGCTTGCCATCATCAGT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E272403] | SGN-U585761 | Tomato 200607 | Build 2 | 45 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T86401 [Download][View] | Facility Assigned ID: TGFCV62TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.978 | Expected Error Rate: 0.0100 | Quality Trim Threshold: 14.5 |
Working
