EST details — SGN-E272083
| Search information |
| Request: 272083 | Match: SGN-E272083 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C65311 | Clone name: cLEM-8-P10 |
| ||
| Library Name: cLEM | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit
Development Stage: immature green fruit
Microarray: Alias clone SGN-C178404 is on microarray TOM1: SGN-S1-1-7.2.4.13
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C178404 [TUS-29-B2] | Trace: SGN-T184245 | EST: SGN-E371478 | Direction: 5' | Facility: INRA |
| Clone: SGN-C178404 [TUS-29-B2] | Trace: SGN-T184315 | EST: SGN-E371548 | Direction: 3' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E272083 | Length: 531 bp (955 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E272083 [] (trimmed)
AGCCAGAGTCCTCGATAAAGCTTATACATGCACAAAAGCCAAAGGTTCCTCAACTGCCTGTATAATTGCCCTCACAGATCAAGGTCTGCATGCTA
TTAATTTAAGAGATAGCGGATTCATTGTGGTCAGAGATGGATCTACTGTTTTCAGATCCCCTGTGCAGCAGCATGATTTCAATTTCACGTATCAA
CTAGAGAGTGGTAATGCTGGTGACTTACCAAGTTCTGGAGAGGTCTTCAAAATACCAGTGGCACAAGGAGATGTTATAATAGCTGGTACTGATGG
GTTGTTTGACAATTTGTACAACAATGATATTAATGCAATCGTCGTTCATGCAACGAGAGCTGGCTTAAGGCCACAAGTGACAGCTCAGAAGATAG
CTGCATTAGCTCGGCAAAGAGCACAGGATAAAAACAGGCAGACCCCTTTCTCTTCTGCAGCTCAAGAAGCTGGGTTCCGTTACTATGGAGGGAAG
CTGGACGATATAACTGTGGTTGTATCCTACATAAGCAGTGACAGAAACGAAAGATC
TTAATTTAAGAGATAGCGGATTCATTGTGGTCAGAGATGGATCTACTGTTTTCAGATCCCCTGTGCAGCAGCATGATTTCAATTTCACGTATCAA
CTAGAGAGTGGTAATGCTGGTGACTTACCAAGTTCTGGAGAGGTCTTCAAAATACCAGTGGCACAAGGAGATGTTATAATAGCTGGTACTGATGG
GTTGTTTGACAATTTGTACAACAATGATATTAATGCAATCGTCGTTCATGCAACGAGAGCTGGCTTAAGGCCACAAGTGACAGCTCAGAAGATAG
CTGCATTAGCTCGGCAAAGAGCACAGGATAAAAACAGGCAGACCCCTTTCTCTTCTGCAGCTCAAGAAGCTGGGTTCCGTTACTATGGAGGGAAG
CTGGACGATATAACTGTGGTTGTATCCTACATAAGCAGTGACAGAAACGAAAGATC
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E272083] | SGN-U566724 | Tomato 200607 | Build 2 | 8 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T85634 [Download][View] | Facility Assigned ID: TGFBF89TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.978 | Expected Error Rate: 0.0189 | Quality Trim Threshold: 14.5 |
Working
