EST details — SGN-E271972
| Search information |
| Request: 271972 | Match: SGN-E271972 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C65086 | Clone name: cLEM-8-E24 |
| ||
| Library Name: cLEM | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit
Development Stage: immature green fruit
Microarray: Alias clone SGN-C178266 is on microarray TOM1: SGN-S1-1-1.4.4.3
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C178266 [TUS-28-L8] | Trace: SGN-T183661 | EST: SGN-E370729 | Direction: 3' | Facility: INRA |
| Clone: SGN-C178266 [TUS-28-L8] | Trace: SGN-T183662 | EST: SGN-E370730 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E271972 | Length: 550 bp (887 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E271972 [] (trimmed)
GTAGATGTCAAAAGCAGGGGAGAAATGAGTTTGTGATACGTCTGCAACCTTCAGAAGCCATGTACATGAAGCTTACGGTCAAGAAACCTGGGCTT
GAAATGTCAACTGTTCAAAGTGAATTAGACCTGTCGTATGGGCAGCGTTACCAAAGAGTTGTCATTCCAGAGGCTTATGAACGTCTGATTCTCGA
CACAATAAGAGGAGATCAGCAGCATTTTGTGCGTAGGGATGAGCTCAAGGCGGCTTGGGAGATTTTTACCCCTCTTTTGCATAGAATTGACAATG
GAGAGGTGAAGCCAATTCCATACAAGCCAGGCAGCAGAGGCCCTGCTGAAGCAGATGAGTTGTTGCAACATGCCGGTTACGTTCAAACTCATGGC
TATATATGGATCCCTCCCACACTATAAGTTTGGAAAAGTATTGCAGATGAGTGCTACCTCGTCACTTTTGCCATGTAGTATCCTGCTTATGTGCA
AACTTATTGAGAAGTAACAAACAGTCCGTGTACCACAAATATATTTGCATGTAATAATCTCATCTTTTTTAAGCT
GAAATGTCAACTGTTCAAAGTGAATTAGACCTGTCGTATGGGCAGCGTTACCAAAGAGTTGTCATTCCAGAGGCTTATGAACGTCTGATTCTCGA
CACAATAAGAGGAGATCAGCAGCATTTTGTGCGTAGGGATGAGCTCAAGGCGGCTTGGGAGATTTTTACCCCTCTTTTGCATAGAATTGACAATG
GAGAGGTGAAGCCAATTCCATACAAGCCAGGCAGCAGAGGCCCTGCTGAAGCAGATGAGTTGTTGCAACATGCCGGTTACGTTCAAACTCATGGC
TATATATGGATCCCTCCCACACTATAAGTTTGGAAAAGTATTGCAGATGAGTGCTACCTCGTCACTTTTGCCATGTAGTATCCTGCTTATGTGCA
AACTTATTGAGAAGTAACAAACAGTCCGTGTACCACAAATATATTTGCATGTAATAATCTCATCTTTTTTAAGCT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E271972] | SGN-U571535 | Tomato 200607 | Build 2 | 65 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T85523 [Download][View] | Facility Assigned ID: TGFBD36TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.976 | Expected Error Rate: 0.0051 | Quality Trim Threshold: 12.5 |
Working
