EST details — SGN-C27196
| Search information |
| Request: 27196 | Match: SGN-C27196 |
| Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C27196 | Clone name: cLEF-42-N16 |
| ||
| Library Name: cLEF | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit pericarp
Development Stage: mature green
Microarray: Alias clone SGN-C176656 is on microarray TOM1: SGN-S1-1-3.1.9.12
See unigene SGN-U568698 for alternative clones/ESTs which are mapped
| Additional sequencing |
| Clone: SGN-C176656 [TUS-24-I6] | Trace: SGN-T193082 | EST: SGN-E391756 | Direction: 5' | Facility: INRA |
| Clone: SGN-C176656 [TUS-24-I6] | Trace: SGN-T193330 | EST: SGN-E392004 | Direction: 3' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E247640 | Length: 521 bp (998 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E247640 [] (trimmed)
AAAGGTGTGGATCANACAGGAAGAGAGCTGGTCAATACTTTGAAGAAGAAAAGTCATCCTGTTAGAGGAAATGATGATATAAAAGCCGTAGCTTC
AATATCAGCTGGAAATGACGAGTTCATTGGCAGTTTGATTGCTGAGGCAATTAACAAGATTGGTCCTGATGGAGTGATATGTATTGAGTCTTCCT
CATCAGCTGAAACCTCGATCATGGTTGAAGAAGGAATGAAGGCGTTCTTTTCCTACAGATTGACAAGGGGTACATGTCACCTCATTTCATCAACA
ATCCCGAAAAATCTATAGTAGAGTTTGAAAATGCCAAAGTTCTGGTAACCGATCAAAAGATATGTAGTGTCAAAGAAATTGTTCCTTTGCTAGAG
AAGGCCACTCAACTGAGTGTGCCACTGCTGATTTTTGCTGAGGACATTACAAACCAAGTGCTAGAAACACTTGTCATTAACAAGATGCAAGGAAT
GCTCAATGTTGCTGTTGTGCAATGTCCAGGATTTCGAGATGGAAAG
AATATCAGCTGGAAATGACGAGTTCATTGGCAGTTTGATTGCTGAGGCAATTAACAAGATTGGTCCTGATGGAGTGATATGTATTGAGTCTTCCT
CATCAGCTGAAACCTCGATCATGGTTGAAGAAGGAATGAAGGCGTTCTTTTCCTACAGATTGACAAGGGGTACATGTCACCTCATTTCATCAACA
ATCCCGAAAAATCTATAGTAGAGTTTGAAAATGCCAAAGTTCTGGTAACCGATCAAAAGATATGTAGTGTCAAAGAAATTGTTCCTTTGCTAGAG
AAGGCCACTCAACTGAGTGTGCCACTGCTGATTTTTGCTGAGGACATTACAAACCAAGTGCTAGAAACACTTGTCATTAACAAGATGCAAGGAAT
GCTCAATGTTGCTGTTGTGCAATGTCCAGGATTTCGAGATGGAAAG
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E247640] | SGN-U568698 | Tomato 200607 | Build 2 | 13 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T60684 [Download][View] | Facility Assigned ID: TMGGL80TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.967 | Expected Error Rate: 0.0126 | Quality Trim Threshold: 14.5 |
Working
