EST details — SGN-E271931
| Search information |
| Request: 271931 | Match: SGN-E271931 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C65077 | Clone name: cLEM-8-E15 |
| ||
| Library Name: cLEM | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit
Development Stage: immature green fruit
Microarray: Alias clone SGN-C178260 is on microarray TOM1: SGN-S1-1-7.4.4.3
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C178260 [TUS-28-L2] | Trace: SGN-T183724 | EST: SGN-E370792 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E271931 | Length: 689 bp (835 bp untrimmed) |
| Status: Current Version | Direction: 5' |
>SGN-E271931 [] (trimmed)
GGGCAGAAGTAATAGGAGCGCCAGCAGCAGCTCAGGTTAAATCAATCTTTGTATATCCAATTAAATCATGCCGTGGAATTTCTGTTTCTCAAGCA
CCTATCACTTCTACTGGATTTCGATGGGATCGACAATGGTTAGTGGTGAATTCCAAAGGCAGGGCCTATACTCAAAGAGTTGAACCAAAGCTTGC
TCTTGTCGAAGTGGCATTGCCAATTGAGGCCTTTTCTGAAGGCTGGGAACCAAATAATGACTCTTATCTAGTTATCAAAGCTCCCGGTATGGATC
CACTGAAAATTCCACTAAGTGACCCATCTGTAGTGTCGGATGGTGTCTCGGTCTGGGAGTGGTCTGGTTCTGCCTTGGACGAGGGAGCTGAGGCA
GCTATGTGGTTCTCCACACATCTGGGGAAACCAAGTCGGCTAGTTCGCTTTAGTGAAGTTAAGGAAATGAGAGTTGTAGATCCTAATTATGCTCA
AGGATACAATGTTATGTTTTCTGATGGATATCCATACCTCATGCTATCCCAGGGATCGATGAATGCGTTAAATTCTCTTCTCAAGGAGCCTGTTC
CAGTAAATCGTTTTAGACCCAATGTCCTTGTTGATGGATGTGAACCATTTGCTGAGGATTTGTGGAAAGAGATCCAAATCAATAAGTTAACATTT
GAGGGTGTCAAACTATGCTCTCGC
CCTATCACTTCTACTGGATTTCGATGGGATCGACAATGGTTAGTGGTGAATTCCAAAGGCAGGGCCTATACTCAAAGAGTTGAACCAAAGCTTGC
TCTTGTCGAAGTGGCATTGCCAATTGAGGCCTTTTCTGAAGGCTGGGAACCAAATAATGACTCTTATCTAGTTATCAAAGCTCCCGGTATGGATC
CACTGAAAATTCCACTAAGTGACCCATCTGTAGTGTCGGATGGTGTCTCGGTCTGGGAGTGGTCTGGTTCTGCCTTGGACGAGGGAGCTGAGGCA
GCTATGTGGTTCTCCACACATCTGGGGAAACCAAGTCGGCTAGTTCGCTTTAGTGAAGTTAAGGAAATGAGAGTTGTAGATCCTAATTATGCTCA
AGGATACAATGTTATGTTTTCTGATGGATATCCATACCTCATGCTATCCCAGGGATCGATGAATGCGTTAAATTCTCTTCTCAAGGAGCCTGTTC
CAGTAAATCGTTTTAGACCCAATGTCCTTGTTGATGGATGTGAACCATTTGCTGAGGATTTGTGGAAAGAGATCCAAATCAATAAGTTAACATTT
GAGGGTGTCAAACTATGCTCTCGC
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E271931] | SGN-U575871 | Tomato 200607 | Build 2 | 53 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T85482 [Download][View] | Facility Assigned ID: TGFBC32TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.976 | Expected Error Rate: 0.0080 | Quality Trim Threshold: 14.5 |
Working
