EST details — SGN-E271930
| Search information |
| Request: 271930 | Match: SGN-E271930 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C65075 | Clone name: cLEM-8-E13 |
| ||
| Library Name: cLEM | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit
Development Stage: immature green fruit
Microarray: Alias clone SGN-C180928 is on microarray TOM1: SGN-S1-1-3.3.17.12
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C180928 [TUS-35-K6] | Trace: SGN-T193882 | EST: SGN-E392556 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E271930 | Length: 690 bp (837 bp untrimmed) |
| Status: Current Version | Direction: 5' |
>SGN-E271930 [] (trimmed)
GATTTTGGAAGCAATGACAACGAAGAATTGTCTCGAGAAGTTTCATTTGGAATCACTTGAGACACTTGGAGACTCCTTTCTCAAATATGCTGCCA
GTATAAAGCTGTTCAAGACTTATGAAAATGATCATCAAGGTCTTCTCACCGTTAAGAGAAAACAAATCATTTCCAACGCTACACTATGCAGGCTT
GGATGTGCTCGTAAAATGCCGGTAGGTATTCCTTGGTGTTCAACTCCATTTCTTCTTTTGGTTTTCCCTTCAATAAGTTCCTTGGATTACAGGGA
TTTATCCGTAATAAACCATTCGTTCTTAAAGCATGGATTATTCCTGGTGATAATTCTCAAGTTCACAACTTCGACGAAGAGCTACTAACGTCCTC
AGTTAAAATGTATAGTAGGGGAAAACAGAAGATTAAAAGTAAGATAATGGCTGATGTGGTCGAGGCACTAATAGGTGCCTACCTCAGCTCGGGTG
GGGAAGTAGCGGCTTTGTCATTTATGAAATGGCTTGGAGTGGACATCAATTTTGTTGATGCACCTACGTCAAGGCACTTACCCGTGAATGCAGAG
AAGCTAGTTAACGTCAGATACTTGGAATCCCTGCTACATTACAAGTTCAATGATCCTTCTCTGCTTGTTGAAGCGCTAAGTCATGGATCTTGCAT
GCTACCTGACATTCCACGATGCTAT
GTATAAAGCTGTTCAAGACTTATGAAAATGATCATCAAGGTCTTCTCACCGTTAAGAGAAAACAAATCATTTCCAACGCTACACTATGCAGGCTT
GGATGTGCTCGTAAAATGCCGGTAGGTATTCCTTGGTGTTCAACTCCATTTCTTCTTTTGGTTTTCCCTTCAATAAGTTCCTTGGATTACAGGGA
TTTATCCGTAATAAACCATTCGTTCTTAAAGCATGGATTATTCCTGGTGATAATTCTCAAGTTCACAACTTCGACGAAGAGCTACTAACGTCCTC
AGTTAAAATGTATAGTAGGGGAAAACAGAAGATTAAAAGTAAGATAATGGCTGATGTGGTCGAGGCACTAATAGGTGCCTACCTCAGCTCGGGTG
GGGAAGTAGCGGCTTTGTCATTTATGAAATGGCTTGGAGTGGACATCAATTTTGTTGATGCACCTACGTCAAGGCACTTACCCGTGAATGCAGAG
AAGCTAGTTAACGTCAGATACTTGGAATCCCTGCTACATTACAAGTTCAATGATCCTTCTCTGCTTGTTGAAGCGCTAAGTCATGGATCTTGCAT
GCTACCTGACATTCCACGATGCTAT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E271930] | SGN-U579850 | Tomato 200607 | Build 2 | 9 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T85481 [Download][View] | Facility Assigned ID: TGFBC31TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.976 | Expected Error Rate: 0.0054 | Quality Trim Threshold: 14.5 |
Working
