EST details — SGN-E271762
| Search information |
| Request: 271762 | Match: SGN-E271762 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C65089 | Clone name: cLEM-8-E5 |
| ||
| Library Name: cLEM | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit
Development Stage: immature green fruit
Microarray: Alias clone SGN-C178269 is on microarray TOM1: SGN-S1-1-6.4.4.7
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C178269 [TUS-28-L11] | Trace: SGN-T183583 | EST: SGN-E371223 | Direction: 3' | Facility: INRA |
| Clone: SGN-C178269 [TUS-28-L11] | Trace: SGN-T183584 | EST: SGN-E371224 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E271762 | Length: 692 bp (832 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E271762 [] (trimmed)
GCTCAACCAAAAACTCAGGCTGTGAAAGGTGGAATATCTGGAGGGTTCAGAATTAGCCGTGGTCCCATGGGAAGGGGCCTTCCCCGAGGAGGACA
CACTCTTGGTAGAGCTAATTTTCCGCGTGGTAGGGGCTTTCACCCTCGTGGACCTGGTCATGGTGGTAGAATGGGCTTCACTGAACATGAGTTTG
GTAGCCCTTATCCTCCTTTCCGTGGACGGTCAAACTTTGGACGAGGGGGGAGGTGGAATTTCAGTGGTGCCCATCCAGTAACCAGTGAGGGTCCA
ATGTTTGTTGATAGAATGAGGCATGGAGATAGAGGTCACACAGATGATGCCTTCTTTAGGAGACAACAATTTCCTATTGAAGGAATTAACCGGCC
ATCCATGGATAGGCACATTGATGACCGTTTCAGTTATGATAATACTGGCCATGGGCTAAAGAGGCCCTTTTCCATGACAGTCCCGAATCCGGATT
ACTTGGGGCCTAGCAGACGTCCGCGGTTTGATCATCCAGATTCTGCAAGTTCTCTTCAAGGAGATCGTTATAGAGATAATGTTCCTCCCAGTGGT
GATCATCAGTATGCACGTGGTTATTATGGCTCTGATTATGGGAGAGGCCAACATCCATCTTTCTATAGAGGTGGTCATCCAAATGGGCGTGGATA
TGGTCGTGGTTATTATTAGTCTTGATG
CACTCTTGGTAGAGCTAATTTTCCGCGTGGTAGGGGCTTTCACCCTCGTGGACCTGGTCATGGTGGTAGAATGGGCTTCACTGAACATGAGTTTG
GTAGCCCTTATCCTCCTTTCCGTGGACGGTCAAACTTTGGACGAGGGGGGAGGTGGAATTTCAGTGGTGCCCATCCAGTAACCAGTGAGGGTCCA
ATGTTTGTTGATAGAATGAGGCATGGAGATAGAGGTCACACAGATGATGCCTTCTTTAGGAGACAACAATTTCCTATTGAAGGAATTAACCGGCC
ATCCATGGATAGGCACATTGATGACCGTTTCAGTTATGATAATACTGGCCATGGGCTAAAGAGGCCCTTTTCCATGACAGTCCCGAATCCGGATT
ACTTGGGGCCTAGCAGACGTCCGCGGTTTGATCATCCAGATTCTGCAAGTTCTCTTCAAGGAGATCGTTATAGAGATAATGTTCCTCCCAGTGGT
GATCATCAGTATGCACGTGGTTATTATGGCTCTGATTATGGGAGAGGCCAACATCCATCTTTCTATAGAGGTGGTCATCCAAATGGGCGTGGATA
TGGTCGTGGTTATTATTAGTCTTGATG
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E271762] | SGN-U563028 | Tomato 200607 | Build 2 | 10 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T85313 [Download][View] | Facility Assigned ID: TGFBC27TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.976 | Expected Error Rate: 0.0075 | Quality Trim Threshold: 14.5 |
Working
