EST details — SGN-C27103
| Search information |
| Request: 27103 | Match: SGN-C27103 |
| Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C27103 | Clone name: cLEF-42-I9 |
| ||
| Library Name: cLEF | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit pericarp
Development Stage: mature green
Microarray: Alias clone SGN-C176609 is on microarray TOM1: SGN-S1-1-2.3.9.11
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C176609 [TUS-24-G7] | Trace: SGN-T197862 | EST: SGN-E396536 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E247675 | Length: 656 bp (924 bp untrimmed) |
| Status: Current Version | Direction: 5' |
>SGN-E247675 [] (trimmed)
TTTATGATGCCTGATCTATTTGAAACAGGAGATGTTGACTTGAAAAAACTATTGAATGCAGAAGATAAAGAGTTAATTGCTCGAATAAAGTCCAT
TCTTGGACCTTTCATTTTGAGAAGATTAAAATCGGATGTGATGAAACAACTGGTACCAAAAATACAGACGGTTCGTTATGTCGGCATGGAGAAAC
AGCAAGAAGATGCATATAAAGAAGCGATTGAAAGCTACCGTGCTGCATCTCTAGCTCGTGTTTCAAAGCAACCTGTTAGTTTGACTAATGCTGCT
GGTGTCTTTTCGAGACGACAAATTTCCAATTATTTTCTTGAATTCCGCAAGATTGCAAACCATCCTCTGCTTGTGAGGCGTATTTATACAGATGA
TGATGTTGTTCGAATTGCTAGAGTTGTGCATCCCAAAGGTGTCTTTGGTTTTGAATGTACAGTGGACAGAGTAATTGAGGAGCTGAAGAGCTACA
ATGACTTCTCCATCCACAAGCTTTTACTTTACTATGGTGATAATAATAAGGGAGTGCTGTCAGATGAGCGTGTTATGATTTCAGCTAAATGTCAG
GAATTAGCCAAACTTCTCCCTTCATTAAACCTTTCTGGTCATCGAGTGCTTATTTTTAGCCAGTGGACATCAATGCTTGATATCCT
TCTTGGACCTTTCATTTTGAGAAGATTAAAATCGGATGTGATGAAACAACTGGTACCAAAAATACAGACGGTTCGTTATGTCGGCATGGAGAAAC
AGCAAGAAGATGCATATAAAGAAGCGATTGAAAGCTACCGTGCTGCATCTCTAGCTCGTGTTTCAAAGCAACCTGTTAGTTTGACTAATGCTGCT
GGTGTCTTTTCGAGACGACAAATTTCCAATTATTTTCTTGAATTCCGCAAGATTGCAAACCATCCTCTGCTTGTGAGGCGTATTTATACAGATGA
TGATGTTGTTCGAATTGCTAGAGTTGTGCATCCCAAAGGTGTCTTTGGTTTTGAATGTACAGTGGACAGAGTAATTGAGGAGCTGAAGAGCTACA
ATGACTTCTCCATCCACAAGCTTTTACTTTACTATGGTGATAATAATAAGGGAGTGCTGTCAGATGAGCGTGTTATGATTTCAGCTAAATGTCAG
GAATTAGCCAAACTTCTCCCTTCATTAAACCTTTCTGGTCATCGAGTGCTTATTTTTAGCCAGTGGACATCAATGCTTGATATCCT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E247675] | SGN-U575034 | Tomato 200607 | Build 2 | 2 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T60719 [Download][View] | Facility Assigned ID: TMGGI53TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.964 | Expected Error Rate: 0.0018 | Quality Trim Threshold: 14.5 |
Working
