EST details — SGN-E270873

Search information 
Request: 270873Match: SGN-E270873
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C64466Clone name: cLEM-6-D3
cartOrder Clone
Library Name: cLEMOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: fruit
Development Stage: immature green fruit

Microarray: Alias clone SGN-C178050 is on microarray TOM1: SGN-S1-1-1.3.4.1
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C178050 [TUS-28-C8] Trace: SGN-T183347 EST: SGN-E370157 Direction: 3' Facility: INRA
Clone: SGN-C178050 [TUS-28-C8] Trace: SGN-T183348 EST: SGN-E370158 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E270873Length: 481 bp (945 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E270873 [] (trimmed) GATCAAATTCTACATAGCCTATAGCTTCAAAAATTGTTGCTAAGCTAAACTTGAAGGTACATCCAGAAAGGGGATTTTACTCAGAAACATTTAGA
GATAACTCAGTTATTCTCTCCAGATCTCATCTTCCATCTACATATAAGGTTGATCGACCTGTCAGTACATGCATCTACTTCTTGCTACCTTCTGG
AAGTGCGTCTCATCTTCACCGGATACCTTGTGCAGAAACATGGCATTTTTATATGGGAGAGCCAATCACTGTGATGGAGCTAAACGAAACTGATG
GCAAGGTGAAGTTAACTTGCGTTGGACCCGATCCCCTCGTAAATGATCAATTCGTGCAGTATACAGTACCTCCAAATGTATGGGTTTGGCGCATT
TCCCACGAAGGATTACAACATATCTTTCGATATGCAAGTAACGAAAGCACCTACAAGAGATGGTGAGAAACATTTCTCTCTAGTTGGATGCACTT
GTGCTC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E270873] SGN-U572921 Tomato 200607 Build 2 12 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T84629 [Download][View] Facility Assigned ID: TGFAW14TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.979 Expected Error Rate: 0.0265 Quality Trim Threshold: 14.5