EST details — SGN-E270757
| Search information |
| Request: 270757 | Match: SGN-E270757 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C64555 | Clone name: cLEM-6-H22 |
| ||
| Library Name: cLEM | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit
Development Stage: immature green fruit
Microarray: Alias clone SGN-C178106 is on microarray TOM1: SGN-S1-1-1.1.4.6
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C178106 [TUS-28-E16] | Trace: SGN-T183420 | EST: SGN-E370230 | Direction: 3' | Facility: INRA |
| Clone: SGN-C178106 [TUS-28-E16] | Trace: SGN-T183421 | EST: SGN-E370231 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E270757 | Length: 511 bp (906 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E270757 [] (trimmed)
GGAGATGTCCATCTTATTACAAAAAAATTGTGGATTTTAAGACATGGGAAATAGGATATCAACATTGTAGAGCTTCAATTGCTATCCTTGCTAAT
GTCTTACTCCATGTTTCTGATTTTAAAATGATAATGTTATATTGTTCGTGTTGCTTTGCTGAGTACTTTCTATTTTGTATGTCGTGCTAAGAGTG
AAATATGATATGAACGTGATAACTAAGAGCTACCTTTTACTGTTATGCAACATGTAAAAAATTATATTACAGTAAACCTATTGACAGAATTAGTG
AAGTCTTGTGTCTCCAAACTAAGTGAAACATATTTGAGTGAACAACTTCATCTTTTTCCTTTATCTAACATGCATATGACTTGTGTGAAACTGCA
CACCAGGTTTGCAATTCACATCCATCTTTCTACCTGATTTAATTTCTTAGATAATTGCAATCTTTGGTAACACTTTCCCTCGGTATTATCCAACA
CATAGTTGTTATGATATTTACCGAGTATTTCACTTA
GTCTTACTCCATGTTTCTGATTTTAAAATGATAATGTTATATTGTTCGTGTTGCTTTGCTGAGTACTTTCTATTTTGTATGTCGTGCTAAGAGTG
AAATATGATATGAACGTGATAACTAAGAGCTACCTTTTACTGTTATGCAACATGTAAAAAATTATATTACAGTAAACCTATTGACAGAATTAGTG
AAGTCTTGTGTCTCCAAACTAAGTGAAACATATTTGAGTGAACAACTTCATCTTTTTCCTTTATCTAACATGCATATGACTTGTGTGAAACTGCA
CACCAGGTTTGCAATTCACATCCATCTTTCTACCTGATTTAATTTCTTAGATAATTGCAATCTTTGGTAACACTTTCCCTCGGTATTATCCAACA
CATAGTTGTTATGATATTTACCGAGTATTTCACTTA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E270757] | SGN-U580153 | Tomato 200607 | Build 2 | 15 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T84513 [Download][View] | Facility Assigned ID: TGFAX47TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.936 | Expected Error Rate: 0.0064 | Quality Trim Threshold: 14.5 |
Working
