EST details — SGN-E270453
| Search information |
| Request: 270453 | Match: SGN-E270453 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C62172 | Clone name: cLEM-1-L13 |
| ||
| Library Name: cLEM | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit
Development Stage: immature green fruit
Microarray: Alias clone SGN-C177785 is on microarray TOM1: SGN-S1-1-2.4.6.8
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C177785 [TUS-27-H7] | Trace: SGN-T183077 | EST: SGN-E370840 | Direction: 3' | Facility: INRA |
| Clone: SGN-C177785 [TUS-27-H7] | Trace: SGN-T183078 | EST: SGN-E370841 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E270453 | Length: 627 bp (842 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E270453 [] (trimmed)
GGACACTTGAGAATGCTGCATGGAAGTATTCCAGAGAGCAAGAAGCTGCTCCTTGAAGCGCAGCCCCGTGATATGAAATTAGGTGCTTCTGTAAC
ATATTAGGTCAGTAGATTCCTTGTAGTTGTATACCCCTATTATAAAGTGAGCCCATCAACTGAAAGTTCATTACTGGGGAGAACCTTGTTTATTC
GTGAACAATAGCTTGAGGGGATCTCTGTTCTCCTTCTGTACAACTTACAAGGAGGTTTTCTATAGAATAATAAGTTGATACAAATATGCTGACTC
ATTGGTTCACCTAACCCTTTCACATAATTCACATACAAATCACCTAGAACAACTTTGTCACTGTAATCTAGAGAATCTTGATCTTACAAGTAACT
TTTAACTTCCTGCAAGGTTGTCTGTCTTCTATATTTTTTACTTTAGCAACCTTTTAGCCTTATGGGTTTTATCACATAACTTCAGTGGGTCGGCT
CCACATTGCTTGGGCATCATGGCTGAATTATTGGTTCTAAACTTGAGAAAGAACAATTTCAGTGGTAGTCTTCTATCGTTATGTTCTCAGAGCAC
TTCATTGATGACCACTGTCTTGAATGGTAATCAATTTAAAGGGTCTACCCTATGTCA
ATATTAGGTCAGTAGATTCCTTGTAGTTGTATACCCCTATTATAAAGTGAGCCCATCAACTGAAAGTTCATTACTGGGGAGAACCTTGTTTATTC
GTGAACAATAGCTTGAGGGGATCTCTGTTCTCCTTCTGTACAACTTACAAGGAGGTTTTCTATAGAATAATAAGTTGATACAAATATGCTGACTC
ATTGGTTCACCTAACCCTTTCACATAATTCACATACAAATCACCTAGAACAACTTTGTCACTGTAATCTAGAGAATCTTGATCTTACAAGTAACT
TTTAACTTCCTGCAAGGTTGTCTGTCTTCTATATTTTTTACTTTAGCAACCTTTTAGCCTTATGGGTTTTATCACATAACTTCAGTGGGTCGGCT
CCACATTGCTTGGGCATCATGGCTGAATTATTGGTTCTAAACTTGAGAAAGAACAATTTCAGTGGTAGTCTTCTATCGTTATGTTCTCAGAGCAC
TTCATTGATGACCACTGTCTTGAATGGTAATCAATTTAAAGGGTCTACCCTATGTCA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E270453] | SGN-U577007 | Tomato 200607 | Build 2 | 19 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T83826 [Download][View] | Facility Assigned ID: TGFAC67TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.965 | Expected Error Rate: 0.0048 | Quality Trim Threshold: 14.5 |
Working
