EST details — SGN-E270058
| Search information |
| Request: 270058 | Match: SGN-E270058 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C64865 | Clone name: cLEM-7-I5 |
| ||
| Library Name: cLEM | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit
Development Stage: immature green fruit
Microarray: Alias clone SGN-C180892 is on microarray TOM1: SGN-S1-1-7.1.17.20
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C180892 [TUS-35-I18] | Trace: SGN-T193639 | EST: SGN-E392313 | Direction: 3' | Facility: INRA |
| Clone: SGN-C180892 [TUS-35-I18] | Trace: SGN-T193640 | EST: SGN-E392314 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E270058 | Length: 691 bp (855 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E270058 [] (trimmed)
GTTCTCATTGTAATCATCGATTGGTTCGTTGAAATTTTTAGTACCAAATTAGCCTCCTTCCATCATGATTATGGACTTCAACATGCCCTACTAGG
AATTAAATTTTGTTTAGCTAGAGTGAAATTCAATGGAGCATTCCGACGATCTTTGCAACATAGAAGGGAACGGAAATGGGAGAGGTAATAACGGT
GCTTCCGGTGCTCCGTCAACATCGGCCGCGACTAGTTCTGCTTACAAGTTGTTCGGCCGGCAAACCTCTTTCCACCAGATGATGGGCGGCGGAAA
AGCTGCTGACGTTATATTGTGGAGGCGGAGGCGTGTCTCTTTTGGCATCATTGTTGCTGCTACAGTTGCTTGGATCATTTTTGAGTATTCAGAGT
TACCTTTCTTATCAGTTTCTTCTGATGTTTTACTGATTCTGATAGTTCTGCTCTTTCTCCGTGCAAACTATGCAGCCTTCAGGAAGAAACAACTC
CCAGCATTACCAGAGTTAGTCTTGTCAGAAGAAATGGTTAATAATGCTGCAGCATCATTTCGGGTCAAAATGAATTATATGCTTCTCATGGCTCA
TGATATCACTCTTGGCAAAGATTTCAAACTATTCTTCAAGGTAGTTATTGTTCTGTGGCTTCTATCTGTCATAGGAAGCGTAATATCTTTCTTCA
CACTTGCATATATTGGAACGATAGTA
AATTAAATTTTGTTTAGCTAGAGTGAAATTCAATGGAGCATTCCGACGATCTTTGCAACATAGAAGGGAACGGAAATGGGAGAGGTAATAACGGT
GCTTCCGGTGCTCCGTCAACATCGGCCGCGACTAGTTCTGCTTACAAGTTGTTCGGCCGGCAAACCTCTTTCCACCAGATGATGGGCGGCGGAAA
AGCTGCTGACGTTATATTGTGGAGGCGGAGGCGTGTCTCTTTTGGCATCATTGTTGCTGCTACAGTTGCTTGGATCATTTTTGAGTATTCAGAGT
TACCTTTCTTATCAGTTTCTTCTGATGTTTTACTGATTCTGATAGTTCTGCTCTTTCTCCGTGCAAACTATGCAGCCTTCAGGAAGAAACAACTC
CCAGCATTACCAGAGTTAGTCTTGTCAGAAGAAATGGTTAATAATGCTGCAGCATCATTTCGGGTCAAAATGAATTATATGCTTCTCATGGCTCA
TGATATCACTCTTGGCAAAGATTTCAAACTATTCTTCAAGGTAGTTATTGTTCTGTGGCTTCTATCTGTCATAGGAAGCGTAATATCTTTCTTCA
CACTTGCATATATTGGAACGATAGTA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E270058] | SGN-U565800 | Tomato 200607 | Build 2 | 3 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T84856 [Download][View] | Facility Assigned ID: TGFAY51TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.976 | Expected Error Rate: 0.0080 | Quality Trim Threshold: 14.5 |
Working
