EST details — SGN-E268975
| Search information |
| Request: 268975 | Match: SGN-E268975 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C47643 | Clone name: cLEI-16-O17 |
| ||
| Library Name: cLEI | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: whole seedlings
Development Stage: germinating seed
Microarray: Alias clone SGN-C177705 is on microarray TOM1: SGN-S1-1-2.4.6.15
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C177705 [TUS-27-D23] | Trace: SGN-T183137 | EST: SGN-E370900 | Direction: 3' | Facility: INRA |
| Clone: SGN-C177705 [TUS-27-D23] | Trace: SGN-T183138 | EST: SGN-E370901 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E268975 | Length: 580 bp (844 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E268975 [] (trimmed)
TTATTAATCATGGCTCAAGAAACATTAAATCTTGAACAAGAGGTTGTTTTGGTTGAAGAACTTGGAAATGCTAGAGTTGTTACCTTAAATAACCC
AAAACAGTTGAATGTCATTTCACCCAAAGTGGTAGTGCTTCTTGCAGCGAATCTCGAGAAGTGGGAGAAAGATGAGAATGCAAACTTGTTATCAT
CAAGGGAGCTGGGCGGGCTTTTTCTGCTGGCGGGGATTTGAAGATGTTCTATAATGGCAGGAATTCAAAGGATTCCTGCCTTGAGGTTGTTTATC
GAATGTATTGGCTTTGCAATCACATTCATACATATAAAAAGACCACGGTTGCTCTTGTTCATGGAATCTCAATGGGCGGAGGTGCATCCTTAATG
GCTCCAATGAAGTTCTCTGTTGTGACTGAAAAGACGGTTTTCTCCACTCCTGAAGCAAGTATAGGCTTCCACACGGACTGCGGTTTCTCATACAT
GCTTTCTCGACTTCCTGGTAGACTCGGGGAATACTTGGGTTTAACTGGAGCGAGGCTGAACGGTAAAGAATTGGTAGCTGTTGGACTTGCAACAC
ATTTTGTACC
AAAACAGTTGAATGTCATTTCACCCAAAGTGGTAGTGCTTCTTGCAGCGAATCTCGAGAAGTGGGAGAAAGATGAGAATGCAAACTTGTTATCAT
CAAGGGAGCTGGGCGGGCTTTTTCTGCTGGCGGGGATTTGAAGATGTTCTATAATGGCAGGAATTCAAAGGATTCCTGCCTTGAGGTTGTTTATC
GAATGTATTGGCTTTGCAATCACATTCATACATATAAAAAGACCACGGTTGCTCTTGTTCATGGAATCTCAATGGGCGGAGGTGCATCCTTAATG
GCTCCAATGAAGTTCTCTGTTGTGACTGAAAAGACGGTTTTCTCCACTCCTGAAGCAAGTATAGGCTTCCACACGGACTGCGGTTTCTCATACAT
GCTTTCTCGACTTCCTGGTAGACTCGGGGAATACTTGGGTTTAACTGGAGCGAGGCTGAACGGTAAAGAATTGGTAGCTGTTGGACTTGCAACAC
ATTTTGTACC
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E268975] | SGN-U581857 | Tomato 200607 | Build 2 | 26 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T83199 [Download][View] | Facility Assigned ID: TGSCI93TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.971 | Expected Error Rate: 0.0069 | Quality Trim Threshold: 14.5 |
Working
