EST details — SGN-E268832
| Search information |
| Request: 268832 | Match: SGN-E268832 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C63935 | Clone name: cLEM-4-D8 |
| ||
| Library Name: cLEM | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit
Development Stage: immature green fruit
Microarray: Alias clone SGN-C180832 is on microarray TOM1: SGN-S1-1-3.3.17.11
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C180832 [TUS-35-G6] | Trace: SGN-T193623 | EST: SGN-E392297 | Direction: 5' | Facility: INRA |
| Clone: SGN-C180832 [TUS-35-G6] | Trace: SGN-T193867 | EST: SGN-E392541 | Direction: 3' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E268832 | Length: 642 bp (858 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E268832 [] (trimmed)
GCTAAGATAGCTCGTAACAATGGCAAGACCATTCTCCATACAGCTGCAAGAATGGGGCACTTGGAAATAGTTAGATCTCTTCTAAGCAAGGATCC
TGAGATTGGCTTTAGAACAGATAAAAAAGGCCAAAGTGCCTTGCACATGGCTGTAAAGGGACAAAATTTTGATATTGTTCTTGAATTAGTCAAAC
CAAATCCTGCTGTATTGGCTTTGGAAGATAACAAAGGAAACAGAGCACTTCATGTTGCAACTATAAAGGGGCGGCCACAGATGGTACAATGTCTA
ATATCAATTGAGGGCATCGATCTCAATGCTGTCAATAAGGCTGGAGACACAGCTCTTGATATTGCAGAAAAGTCTGGCTCTCCGCAGCTCATTTC
CATTTTGAAGGAGGCAGGAGCTACCCGTTCTAAAGATGATGGGAGACCTCCAACGGCTGCAAAGCAGCTCAAACAGACTGTCAGTGACATACGAC
ATGATGTGGAGTCCCAACTCCAACACAGTCGTCAAACTGGTTTCAGAGTGCGGAAAATTGCAAAGAATGTGAAAAAGCTCCACATTAGTGGTCTT
AACAATGCAATCAACAATGCGACAGTTGTTGCTGTTCTTATTGCTACTGTAGCTTTTGCTGCCATCTTCACT
TGAGATTGGCTTTAGAACAGATAAAAAAGGCCAAAGTGCCTTGCACATGGCTGTAAAGGGACAAAATTTTGATATTGTTCTTGAATTAGTCAAAC
CAAATCCTGCTGTATTGGCTTTGGAAGATAACAAAGGAAACAGAGCACTTCATGTTGCAACTATAAAGGGGCGGCCACAGATGGTACAATGTCTA
ATATCAATTGAGGGCATCGATCTCAATGCTGTCAATAAGGCTGGAGACACAGCTCTTGATATTGCAGAAAAGTCTGGCTCTCCGCAGCTCATTTC
CATTTTGAAGGAGGCAGGAGCTACCCGTTCTAAAGATGATGGGAGACCTCCAACGGCTGCAAAGCAGCTCAAACAGACTGTCAGTGACATACGAC
ATGATGTGGAGTCCCAACTCCAACACAGTCGTCAAACTGGTTTCAGAGTGCGGAAAATTGCAAAGAATGTGAAAAAGCTCCACATTAGTGGTCTT
AACAATGCAATCAACAATGCGACAGTTGTTGCTGTTCTTATTGCTACTGTAGCTTTTGCTGCCATCTTCACT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E268832] | SGN-U586264 | Tomato 200607 | Build 2 | 8 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T84250 [Download][View] | Facility Assigned ID: TGFAP16TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.964 | Expected Error Rate: 0.0018 | Quality Trim Threshold: 14.5 |
Working
