EST details — SGN-E268366

Search information 
Request: 268366Match: SGN-E268366
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C46578Clone name: cLEI-13-A16
cartOrder Clone
Library Name: cLEIOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: whole seedlings
Development Stage: germinating seed

Microarray: Alias clone SGN-C177594 is on microarray TOM1: SGN-S1-1-1.4.7.19
See unigene SGN-U578867 for alternative clones/ESTs which are mapped
Additional sequencing 
Clone: SGN-C177594 [TUS-26-P8] Trace: SGN-T182686 EST: SGN-E370072 Direction: 3' Facility: INRA
Clone: SGN-C177594 [TUS-26-P8] Trace: SGN-T182687 EST: SGN-E370073 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E268366Length: 436 bp (844 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E268366 [] (trimmed) GACTATTAAAAGAGGATCATACGATGAGAGAAGCAAACTTACAAATATGTTACATCCAAACCCACCAAACAAAAAATAAATTATACCAAAGCTAT
ATGTAAAATTTGGCACATAAAACAAACTCATATAGTAGTAACTTTTCAAAGTGCGGGTTTGATGATGGCATAGTTTGTGTATTTGCCTAATGGAT
CTTATTAACTTTTCAACATGCCATTGAGTTCCCTAACGAATATTTTCATTGCAAAAGCAGGCAAACATACAGGCACCACAATTCCATTTTCACCA
TTTTTGTTTGTAAATGGTATGTAAAAACTCGCCACACCAGGGATTGCTCCTACTCCTCCTTTAGCCGGTCCACCATACGCTGCTTTGCCCCATCC
AAAATCTACTTGTCCGAATCCCGCTCGAGTCACGTCTGACACCAGATAAATCCGCA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E268366] SGN-U578867 Tomato 200607 Build 2 30 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T82427 [Download][View] Facility Assigned ID: TGSBX08TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.949 Expected Error Rate: 0.0187 Quality Trim Threshold: 14.5