EST details — SGN-E267270
| Search information |
| Request: 267270 | Match: SGN-E267270 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C48336 | Clone name: cLEI-4-D18 |
| ||
| Library Name: cLEI | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: whole seedlings
Development Stage: germinating seed
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C188814 [TUS-56-C20] | Trace: SGN-T338401 | EST: SGN-E537526 | Direction: 3' | Facility: INRA (MWG) |
| Clone: SGN-C188814 [TUS-56-C20] | Trace: SGN-T338404 | EST: SGN-E537529 | Direction: 5' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E267270 | Length: 505 bp (891 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E267270 [] (trimmed)
GAAGCCCCAAATTCTTAATTTTAGCTAAAAAGGGGTTAAAGCTGATGATTTTACAGCATTCAATTTCAATTTGTAAGCTATGGAGGTCGTCATCT
CCACCAAACCTCTATTTGTTTCGACCCTTTGTTGCTTATCAACCACACTGTTGTAGGATTAGAGCATTTGGGTCTGCTGTTTCAGCCTCTAAAGT
TGTTGAAACAAATACAAATGAGACATTTTTTGCTGAAGAAAGTGTTTCTTGGACCTCTTTGGGTGTGTCTGAATCATTATCTCGTGCTTTATCTA
GCAGTGGCCTTCATAGACCATCTTTAATTCAGGCAGCTTGTATACCAAGTATACTTTCAGGTGTTGATGTGGTGGTTGCTGCANAGACTGGTAGC
GGCAAGACTCATGGTTACCTAGTGCCACTGATTGATAAGCTATGCCAAATATCTGATAGTTCAGGGGCTATTACTGGCCAAGATGCCAGGAAGCA
CAATCGTCTTTCGCTTGTTCTTTGTCCTAA
CCACCAAACCTCTATTTGTTTCGACCCTTTGTTGCTTATCAACCACACTGTTGTAGGATTAGAGCATTTGGGTCTGCTGTTTCAGCCTCTAAAGT
TGTTGAAACAAATACAAATGAGACATTTTTTGCTGAAGAAAGTGTTTCTTGGACCTCTTTGGGTGTGTCTGAATCATTATCTCGTGCTTTATCTA
GCAGTGGCCTTCATAGACCATCTTTAATTCAGGCAGCTTGTATACCAAGTATACTTTCAGGTGTTGATGTGGTGGTTGCTGCANAGACTGGTAGC
GGCAAGACTCATGGTTACCTAGTGCCACTGATTGATAAGCTATGCCAAATATCTGATAGTTCAGGGGCTATTACTGGCCAAGATGCCAGGAAGCA
CAATCGTCTTTCGCTTGTTCTTTGTCCTAA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E267270] | SGN-U565609 | Tomato 200607 | Build 2 | 7 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T80417 [Download][View] | Facility Assigned ID: TGSAP21TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.973 | Expected Error Rate: 0.0137 | Quality Trim Threshold: 14.5 |
Working
