EST details — SGN-E258863
| Search information |
| Request: 258863 | Match: SGN-E258863 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C37377 | Clone name: cLEG-41-O11 |
| ||
| Library Name: cLEG | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit pericarp
Development Stage: breaker fruit
Microarray: Alias clone SGN-C177407 is on microarray TOM1: SGN-S1-1-4.4.7.21
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C177407 [TUS-26-H13] | Trace: SGN-T182491 | EST: SGN-E369877 | Direction: 3' | Facility: INRA |
| Clone: SGN-C177407 [TUS-26-H13] | Trace: SGN-T182492 | EST: SGN-E369878 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E258863 | Length: 425 bp (883 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E258863 [] (trimmed)
TTCTGAAGGGAAATGTGGTTGTTGCAAAAAATCCATGCTTGCATCCTGGTGATATTCGTGTTTTAAAGGCTGTAAATGTTCGAGCGCTGCACCAC
ATGGTAGATTGTGTTGTATTCCCTCAGAAAGGAAAAAGACCTCATCCGAATGAATGTTCTGGGAGTGATTTGGATGGGGATATCTACTTTGTTTG
CTGGGATCAAGACATGATCCCGCCAAGGCAAGTCCAGCCGATGGAATATCCTCCAGCACCCATCATACAGTTGGACCATGATGTCACAATTGAGG
AAGTTGAAGAGTACTTCACCAACTATATTGTGAATGACAGTTTGGGAATCATAGCAAATGCCCATGTCGTATTTGCAGACAGAGAACCTGATATG
GCCATGAGTGATCCATGCAAAAAACTTGCTGAGCTCTTTTCAATT
ATGGTAGATTGTGTTGTATTCCCTCAGAAAGGAAAAAGACCTCATCCGAATGAATGTTCTGGGAGTGATTTGGATGGGGATATCTACTTTGTTTG
CTGGGATCAAGACATGATCCCGCCAAGGCAAGTCCAGCCGATGGAATATCCTCCAGCACCCATCATACAGTTGGACCATGATGTCACAATTGAGG
AAGTTGAAGAGTACTTCACCAACTATATTGTGAATGACAGTTTGGGAATCATAGCAAATGCCCATGTCGTATTTGCAGACAGAGAACCTGATATG
GCCATGAGTGATCCATGCAAAAAACTTGCTGAGCTCTTTTCAATT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E258863] | SGN-U577143 | Tomato 200607 | Build 2 | 18 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T71895 [Download][View] | Facility Assigned ID: TBFGE90TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.973 | Expected Error Rate: 0.0111 | Quality Trim Threshold: 14.5 |
Working
