EST details — SGN-E256267
| Search information |
| Request: 256267 | Match: SGN-E256267 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C35950 | Clone name: cLEG-37-B10 |
| ||
| Library Name: cLEG | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit pericarp
Development Stage: breaker fruit
Microarray: Alias clone SGN-C180939 is on microarray TOM1: SGN-S1-1-8.3.17.20
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C180939 [TUS-35-K17] | Trace: SGN-T187419 | EST: SGN-E375651 | Direction: 3' | Facility: INRA |
| Clone: SGN-C180939 [TUS-35-K17] | Trace: SGN-T187420 | EST: SGN-E375652 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E256267 | Length: 618 bp (907 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E256267 [] (trimmed)
GCCATTTATGGGGGGCCCACCTCATACGTCTCCGCCTTTTATACCTACCCCCATGCCTGTACAGCCCTATCGACCTCCCATGGTTTACTCTGAAG
TTCCACCATTATTTTATTTTCCAGGTCCGTTCCCTGATTCACTAAGAATGCCTATGCTTTCTCCTGTACCACCTGTCTATTTTCATCTTCCAGAT
ACCCAGTTGCACAATAGAATAGTGAACCAGATAGATTATTATTTCAGTAATGAGAATTTAATTAAGGACATATTCTTGCGAGAGCAGATGGATGA
ACAGGGATGGGTACCAGTTACGCTAATAGCAGGATTCAAGAAAGTAATGGAGTTGACGGATAATATACAACTGATACTGAATGTTGTGAGGTCCT
CTACTGTTGTAGAAGTGCAGGGTGAAAAGTTAAGGCGGAGAAATGACTGGTCTCATTGGCTGATACCAGCATCAGTACATAATTCAACCATGTCA
AGTCCTCAATCTCCTCAAATGCCTAGTCCTGATTTGCTTGCAGAAAATCTCCAACGTGTTGTATTTGATTATAAGACTACAGGACATGGAAACAC
TGAAGCACATCTTAGTAGATCATCATCTACTGCATTAAGTAGTCCATT
TTCCACCATTATTTTATTTTCCAGGTCCGTTCCCTGATTCACTAAGAATGCCTATGCTTTCTCCTGTACCACCTGTCTATTTTCATCTTCCAGAT
ACCCAGTTGCACAATAGAATAGTGAACCAGATAGATTATTATTTCAGTAATGAGAATTTAATTAAGGACATATTCTTGCGAGAGCAGATGGATGA
ACAGGGATGGGTACCAGTTACGCTAATAGCAGGATTCAAGAAAGTAATGGAGTTGACGGATAATATACAACTGATACTGAATGTTGTGAGGTCCT
CTACTGTTGTAGAAGTGCAGGGTGAAAAGTTAAGGCGGAGAAATGACTGGTCTCATTGGCTGATACCAGCATCAGTACATAATTCAACCATGTCA
AGTCCTCAATCTCCTCAAATGCCTAGTCCTGATTTGCTTGCAGAAAATCTCCAACGTGTTGTATTTGATTATAAGACTACAGGACATGGAAACAC
TGAAGCACATCTTAGTAGATCATCATCTACTGCATTAAGTAGTCCATT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E256267] | SGN-U573253 | Tomato 200607 | Build 2 | 43 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T70751 [Download][View] | Facility Assigned ID: TBFFR05TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.967 | Expected Error Rate: 0.0070 | Quality Trim Threshold: 14.5 |
Working
