EST details — SGN-E255537
| Search information |
| Request: 255537 | Match: SGN-E255537 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C34242 | Clone name: cLEG-30-D8 |
| ||
| Library Name: cLEG | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit pericarp
Development Stage: breaker fruit
Microarray: Alias clone SGN-C177176 is on microarray TOM1: SGN-S1-1-3.2.8.12
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C177176 [TUS-25-N22] | Trace: SGN-T182087 | EST: SGN-E369598 | Direction: 3' | Facility: INRA |
| Clone: SGN-C177176 [TUS-25-N22] | Trace: SGN-T182088 | EST: SGN-E369599 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E255537 | Length: 670 bp (877 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E255537 [] (trimmed)
TCTCGCCCTCAACAACTGCATTCTGTTCCATGGGCTCCGTCCCACATGCTCAATGCACTGGTACCAATAAACAACCATCATGTGGGTTCAGCGCC
CTCTGTTAATCCATCCCTCTCTCTCTGGGATAGAAGACATGCCTATGCAGGAGAATCTCCAGATGCATCTGGTTTTCATCCAGGTTCTCTGGGAA
GTATGAGGATTTCTGGAAATTCACCACATCCTTTGGAGTTCATTCCTCATAACGTTTTCTCGCGCACTGGTGGCAGCTGTATAGACTTGCCCATG
TCTTCCAGTAATGTCGGCCATCAGCAGAGAAATTTAATGTTTCCTGGTAGAGCTCAAATAATTCCTATGATCAGTTCGTTTGATTCTCCAAATGA
AAGGATGCGGAGCCGTAGGAATGAAGGCAATTCAAGTCAGACTGACAACAAGAAGCAGTTTGAACTGGATATTGAACGGATTGCACGAGGGGACG
ATAAAAGGACAACCCTAATGATAAAGAATATTCCTAACAAATATACTTCAAAAATGCTTTTGGCTGCAATAGATGAGCGTCACAGAGGAACATAT
GATTTCATCTATCTACCCATTGATTTCAAGAACAAATGCAACGTAGGCTATGCGTTTATCAACATGACTGAGCCTTCTCTTATTGTTCCGTTTTA
TCATG
CTCTGTTAATCCATCCCTCTCTCTCTGGGATAGAAGACATGCCTATGCAGGAGAATCTCCAGATGCATCTGGTTTTCATCCAGGTTCTCTGGGAA
GTATGAGGATTTCTGGAAATTCACCACATCCTTTGGAGTTCATTCCTCATAACGTTTTCTCGCGCACTGGTGGCAGCTGTATAGACTTGCCCATG
TCTTCCAGTAATGTCGGCCATCAGCAGAGAAATTTAATGTTTCCTGGTAGAGCTCAAATAATTCCTATGATCAGTTCGTTTGATTCTCCAAATGA
AAGGATGCGGAGCCGTAGGAATGAAGGCAATTCAAGTCAGACTGACAACAAGAAGCAGTTTGAACTGGATATTGAACGGATTGCACGAGGGGACG
ATAAAAGGACAACCCTAATGATAAAGAATATTCCTAACAAATATACTTCAAAAATGCTTTTGGCTGCAATAGATGAGCGTCACAGAGGAACATAT
GATTTCATCTATCTACCCATTGATTTCAAGAACAAATGCAACGTAGGCTATGCGTTTATCAACATGACTGAGCCTTCTCTTATTGTTCCGTTTTA
TCATG
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E255537] | SGN-U570379 | Tomato 200607 | Build 2 | 36 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T69263 [Download][View] | Facility Assigned ID: TBFEP16TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.975 | Expected Error Rate: 0.0081 | Quality Trim Threshold: 14.5 |
Working
