EST details — SGN-E255275
| Search information |
| Request: 255275 | Match: SGN-E255275 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C34186 | Clone name: cLEG-30-A3 |
| ||
| Library Name: cLEG | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit pericarp
Development Stage: breaker fruit
Microarray: Alias clone SGN-C183725 is on microarray TOM1: SGN-S1-1-6.3.1.9
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C183725 [TUS-42-O19] | Trace: SGN-T199411 | EST: SGN-E398085 | Direction: 3' | Facility: INRA |
| Clone: SGN-C183725 [TUS-42-O19] | Trace: SGN-T199647 | EST: SGN-E398321 | Direction: 5' | Facility: INRA |
| Clone: SGN-C183725 [TUS-42-O19] | Trace: SGN-T199647 | EST: SGN-E399207 | Direction: 5' | Facility: INRA |
| Clone: SGN-C183725 [TUS-42-O19] | Trace: SGN-T200263 | EST: SGN-E399206 | Direction: 3' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E255275 | Length: 588 bp (875 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E255275 [] (trimmed)
GGAAGAGTCCAGTTGAAGCGAATAGAGAACAAAATTAACCGTCAAGTTACCTTCTCGAAACGTCGATCTGGTTTGCTGAAGAAAGCCCATGAGAT
CTCTGTGCTTTGTGATGCTGAGGTTGGTTTGATTGTTTTTTCTACTAAAGGAAAACTCTTTGAATATGCCAACGATTCCTGCATGGAGAGGATAC
TTGAAAGATATGAAAGATACTCATTTGCTGAGAAACAGCTTGTTCCTACTGATCATACCTCCCCGGTAAGCTGGACCCTTGAACATGCAAAACTT
AAGGCCAGACTTGAGGTTCTGCAGAGGAACCAAAAGCATTATGTGGGAGAAGATTTGGAGTCCTTAAGTATGAAGGAACTTCAGAATCTGGAGCA
CCAGCTTGATTCAGCTCTTAAACACATTCGATCAAGAAAGAATCAATTGATGCATGAGTCCATTTCTGTGCTTCAAAAAAAGGACAGAGCATTGC
AGGAGCAAAACAACCAGCTTTCGAAGAAGGTGAAGGAGAGGGAGAAAGAGGTGGCACAGCAAAATCAGTGGGAAATCAACTCATCTTCATTTGTT
TTGCCACAACAACTGGAC
CTCTGTGCTTTGTGATGCTGAGGTTGGTTTGATTGTTTTTTCTACTAAAGGAAAACTCTTTGAATATGCCAACGATTCCTGCATGGAGAGGATAC
TTGAAAGATATGAAAGATACTCATTTGCTGAGAAACAGCTTGTTCCTACTGATCATACCTCCCCGGTAAGCTGGACCCTTGAACATGCAAAACTT
AAGGCCAGACTTGAGGTTCTGCAGAGGAACCAAAAGCATTATGTGGGAGAAGATTTGGAGTCCTTAAGTATGAAGGAACTTCAGAATCTGGAGCA
CCAGCTTGATTCAGCTCTTAAACACATTCGATCAAGAAAGAATCAATTGATGCATGAGTCCATTTCTGTGCTTCAAAAAAAGGACAGAGCATTGC
AGGAGCAAAACAACCAGCTTTCGAAGAAGGTGAAGGAGAGGGAGAAAGAGGTGGCACAGCAAAATCAGTGGGAAATCAACTCATCTTCATTTGTT
TTGCCACAACAACTGGAC
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E255275] | SGN-U578128 | Tomato 200607 | Build 2 | 67 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T69001 [Download][View] | Facility Assigned ID: TBFEM02THB |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.967 | Expected Error Rate: 0.0086 | Quality Trim Threshold: 14.5 |
Working
