EST details — SGN-E254975
| Search information |
| Request: 254975 | Match: SGN-E254975 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C35175 | Clone name: cLEG-33-N9 |
| ||
| Library Name: cLEG | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit pericarp
Development Stage: breaker fruit
Microarray: Alias clone SGN-C183133 is on microarray TOM1: SGN-S1-1-6.3.3.5
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C183133 [TUS-41-G3] | Trace: SGN-T191486 | EST: SGN-E390160 | Direction: 3' | Facility: INRA |
| Clone: SGN-C183133 [TUS-41-G3] | Trace: SGN-T191487 | EST: SGN-E390161 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E254975 | Length: 665 bp (854 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E254975 [] (trimmed)
AAAAAAAGAGGCGATTTTCAGGAGAAAAAAATGGCGAGTGCTAGTGTGGTGAAGCTCAACGCATCGTCATCTTCATGGATCGGTCAACAATCGTT
CAATCAACGGTCTGGATCTTCCTGCCGGTTGCCTGTTTCGAATCGCCGTGTTTCAGTCATCCGTGCTGCTGGATCTTACACCGATGAGCTCATCA
AAACCGCTAAAACTATTGCTTCTCCTGGAAGGGGCATCCTTGCCATTGATGAATCGAATGCAACTGCCGGAAAGAGACTGGCGTCAATTGGTCTG
GACAACACAGAAGCAAACAGACAAGCTTACCGTCAACTCTTGTTGACCATTCCTGGCCTAGGTGATTACATCTCTGGATCCATTCTATTCGAAGA
GACACTTTTCCAGTCCACTACCGATGGGAAGAAGTTTGTTGATGTCTTGCGCGATCAGAAGATTGTACCTGGAATCAAAGTTGACAAGGGTTTGG
TTCCCCTACCAGGATCCAACAATGAATCCTGGTGCCAAGGATTGGATGGATTGGCTTCTAGGTCTGCTGAATACTACAAGCAAGGGGCACGTTTT
GCCAAGTGGAGAACAGTTGTTAGCATTCCTTGCGGTCCTTCTGCTTTGGCTGTAAAAGAAGCAGCTTGGGGTCTTGCTCGATATGCTGCTATATC
CAATCAACGGTCTGGATCTTCCTGCCGGTTGCCTGTTTCGAATCGCCGTGTTTCAGTCATCCGTGCTGCTGGATCTTACACCGATGAGCTCATCA
AAACCGCTAAAACTATTGCTTCTCCTGGAAGGGGCATCCTTGCCATTGATGAATCGAATGCAACTGCCGGAAAGAGACTGGCGTCAATTGGTCTG
GACAACACAGAAGCAAACAGACAAGCTTACCGTCAACTCTTGTTGACCATTCCTGGCCTAGGTGATTACATCTCTGGATCCATTCTATTCGAAGA
GACACTTTTCCAGTCCACTACCGATGGGAAGAAGTTTGTTGATGTCTTGCGCGATCAGAAGATTGTACCTGGAATCAAAGTTGACAAGGGTTTGG
TTCCCCTACCAGGATCCAACAATGAATCCTGGTGCCAAGGATTGGATGGATTGGCTTCTAGGTCTGCTGAATACTACAAGCAAGGGGCACGTTTT
GCCAAGTGGAGAACAGTTGTTAGCATTCCTTGCGGTCCTTCTGCTTTGGCTGTAAAAGAAGCAGCTTGGGGTCTTGCTCGATATGCTGCTATATC
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E254975] | SGN-U580521 | Tomato 200607 | Build 2 | 144 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T70011 [Download][View] | Facility Assigned ID: TBFFA77TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.984 | Expected Error Rate: 0.0084 | Quality Trim Threshold: 14.5 |
Working
