EST details — SGN-E253045
Search information |
Request: 253045 | Match: SGN-E253045 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C33111 | Clone name: cLEG-25-G5 |
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Library Name: cLEG | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit pericarp
Development Stage: breaker fruit
Microarray: Alias clone SGN-C180376 is on microarray TOM1: SGN-S1-1-3.4.19.4
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C180376 [TUS-34-D6] | Trace: SGN-T187208 | EST: SGN-E375440 | Direction: 3' | Facility: INRA |
Clone: SGN-C180376 [TUS-34-D6] | Trace: SGN-T187209 | EST: SGN-E375441 | Direction: 5' | Facility: INRA |
Sequence |
Sequence Id: SGN-E253045 | Length: 529 bp (909 bp untrimmed) |
Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E253045 [] (trimmed)
GGATCTGCTCCTAACCTAGATTTTATTATGATCAACAATGACAAGGAAGTGCGTATGGATAATGAATGAATATATCGTGCTGGTTTGTGTCCTTA
TCCCTTATGATTTTTGATGCTTTTGTTCTGTCCTAATGTATTGTCTTCTGAGAGGGCCACCTGCCGTGTAATAGAGCTTAATGCCCATTTTCTAC
TTGCAGGGGGTGCAGGTTTTCAATTCTTTGATAAGCTATCTGAAAAGTTTTCGACCTTTAATTTTTTTGGTGTTCTGGCTTTAGATATGCTTCTT
TTTGTGCATCATTCGTTGTTTGTTATTGCATCTACCCTTTGAATTATTATTTCAAGTTGAAATAGTGGTTTGAACATAAATTATCATTGAATTTG
TAGACTTGAAGTTCCACCCACAATTTTCAACTGTCACAAACTTCTTATCCCAAAAACATAGCTATTTGAACACAACTTCAACCACCTGCCCTAAA
TGTTTGTGTCATTTCAATTTGTTTTTACAATTTTGAACTTCTGTTGAGTGTTAT
TCCCTTATGATTTTTGATGCTTTTGTTCTGTCCTAATGTATTGTCTTCTGAGAGGGCCACCTGCCGTGTAATAGAGCTTAATGCCCATTTTCTAC
TTGCAGGGGGTGCAGGTTTTCAATTCTTTGATAAGCTATCTGAAAAGTTTTCGACCTTTAATTTTTTTGGTGTTCTGGCTTTAGATATGCTTCTT
TTTGTGCATCATTCGTTGTTTGTTATTGCATCTACCCTTTGAATTATTATTTCAAGTTGAAATAGTGGTTTGAACATAAATTATCATTGAATTTG
TAGACTTGAAGTTCCACCCACAATTTTCAACTGTCACAAACTTCTTATCCCAAAAACATAGCTATTTGAACACAACTTCAACCACCTGCCCTAAA
TGTTTGTGTCATTTCAATTTGTTTTTACAATTTTGAACTTCTGTTGAGTGTTAT
Unigenes |
Current Unigene builds | |||||
[SGN-E253045] | SGN-U578375 | Tomato 200607 | Build 2 | 8 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T67968 [Download][View] | Facility Assigned ID: TBFDS39TH |
Submitter: Koni | Sequencing Facility: TIGR |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.923 | Expected Error Rate: 0.0108 | Quality Trim Threshold: 14.5 |