EST details — SGN-E252637
| Search information |
| Request: 252637 | Match: SGN-E252637 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C32685 | Clone name: cLEG-20-P5 |
| ||
| Library Name: cLEG | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit pericarp
Development Stage: breaker fruit
Microarray: Alias clone SGN-C180679 is on microarray TOM1: SGN-S1-1-4.4.19.15
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C180679 [TUS-34-P21] | Trace: SGN-T187111 | EST: SGN-E375209 | Direction: 3' | Facility: INRA |
| Clone: SGN-C180679 [TUS-34-P21] | Trace: SGN-T187112 | EST: SGN-E375210 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E252637 | Length: 626 bp (913 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E252637 [] (trimmed)
AAAACCTAGTTCAATTAATATATTGTGATTCTGTTTTACTTCCTTGGTTTAGACTTAATTTGGATCTGTAGTTTTATCAGTACATTCTGATTCTG
TTTTACTTCCCCAATTAATTTGCATCTGAAGTTTGATCAGAATCCCCAAATTCATGTTTTTGCTAATTAGGTTAAGCCGTTTGATTGACTTACTA
TTTTGTTGTAATTGTTGGTTACAATTACAGTAATTTCAGTTTAGATGGCTAATACAGCTTCTATCAGAACAAATAACTCAGCCTTCACTGCTATG
ATTCACTATATAACCTTTCACTAATTACCAATATGCTTTTATATCTATCTTTACAATTTGAATTTGTTACCTAAAATGCGTGGAGGTCAGGATTA
GGTTAGAAGGTTAGTAAGAGTATTCTTGCACTTTGTTATATTGTCTTCTATGGTTATTACTTTCCGTTGTTTCATTTTGTTTGAATCTTGTTGTT
TTGCTGTCATATTTCTTGCTACCATGCTTCGAGTCCTTTTCTTTTCTTGTCGAGCCATGGGTCTATCGAAAATAACTTCTCTACACTACAAAGTT
AAGGTCTACATCCTACCCTCACCGGAACTCACTTGTGGGATTACAGCGAGTATGTT
TTTTACTTCCCCAATTAATTTGCATCTGAAGTTTGATCAGAATCCCCAAATTCATGTTTTTGCTAATTAGGTTAAGCCGTTTGATTGACTTACTA
TTTTGTTGTAATTGTTGGTTACAATTACAGTAATTTCAGTTTAGATGGCTAATACAGCTTCTATCAGAACAAATAACTCAGCCTTCACTGCTATG
ATTCACTATATAACCTTTCACTAATTACCAATATGCTTTTATATCTATCTTTACAATTTGAATTTGTTACCTAAAATGCGTGGAGGTCAGGATTA
GGTTAGAAGGTTAGTAAGAGTATTCTTGCACTTTGTTATATTGTCTTCTATGGTTATTACTTTCCGTTGTTTCATTTTGTTTGAATCTTGTTGTT
TTGCTGTCATATTTCTTGCTACCATGCTTCGAGTCCTTTTCTTTTCTTGTCGAGCCATGGGTCTATCGAAAATAACTTCTCTACACTACAAAGTT
AAGGTCTACATCCTACCCTCACCGGAACTCACTTGTGGGATTACAGCGAGTATGTT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E252637] | SGN-U568589 | Tomato 200607 | Build 2 | 13 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T67487 [Download][View] | Facility Assigned ID: TBFDA87TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.936 | Expected Error Rate: 0.0027 | Quality Trim Threshold: 14.5 |
Working
