EST details — SGN-E252629
| Search information |
| Request: 252629 | Match: SGN-E252629 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C32632 | Clone name: cLEG-20-L9 |
| ||
| Library Name: cLEG | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit pericarp
Development Stage: breaker fruit
Microarray: Alias clone SGN-C180675 is on microarray TOM1: SGN-S1-1-8.4.19.15
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C180675 [TUS-34-P17] | Trace: SGN-T187191 | EST: SGN-E375289 | Direction: 3' | Facility: INRA |
| Clone: SGN-C180675 [TUS-34-P17] | Trace: SGN-T187192 | EST: SGN-E375290 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E252629 | Length: 611 bp (903 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E252629 [] (trimmed)
TTTTGTAAATTCAGGGACAGAAGCATATGAATTAGCAATGTTGATGGCACGATTGTACAGCGGTCACTTAAATATGATTGCCTTGAGGAATGCAT
ATCATGGTGGAAGCTCTAACACGATTGGGCTAACTGCTCTTAACACATGGAAGTACCCTATTCCACAGGGTGAAATCCATCACGTTATGAATCCT
AACCCATATCGTGGAGCATTTGGATCCGATGCTAAACGATATGCTGAAGATGTACAGAATCACATTGATCATGGTACTTCAGGAAAGGTTGCTGG
TTTTATTGCTGAAACAATTCAGGGGGTTGGAGGAACAGTTGAATTAGCCCCTGGATACTTGAAGTTGGTTTATGATATTGCTCGCAAAGCGGGAG
GCGTTTGTATTGCTGACGAAGTACAAACCGGCTTTGGTCGAACAGGGAGCCACTACTGGGGTTTTCAGACACAGGGTGTAACTCCTGATATAGTT
ACAATGGCAAACGGTATTGGAAATGGCTTACCGCTTGGAGCTGTTGTCACAACGCCACAAATTGCAAGTGTTATGGCTCAAAAGATTCAATTTAA
TACATATGGTGGAAACCCTGTTTGCTCTGCTGGTGGACATG
ATCATGGTGGAAGCTCTAACACGATTGGGCTAACTGCTCTTAACACATGGAAGTACCCTATTCCACAGGGTGAAATCCATCACGTTATGAATCCT
AACCCATATCGTGGAGCATTTGGATCCGATGCTAAACGATATGCTGAAGATGTACAGAATCACATTGATCATGGTACTTCAGGAAAGGTTGCTGG
TTTTATTGCTGAAACAATTCAGGGGGTTGGAGGAACAGTTGAATTAGCCCCTGGATACTTGAAGTTGGTTTATGATATTGCTCGCAAAGCGGGAG
GCGTTTGTATTGCTGACGAAGTACAAACCGGCTTTGGTCGAACAGGGAGCCACTACTGGGGTTTTCAGACACAGGGTGTAACTCCTGATATAGTT
ACAATGGCAAACGGTATTGGAAATGGCTTACCGCTTGGAGCTGTTGTCACAACGCCACAAATTGCAAGTGTTATGGCTCAAAAGATTCAATTTAA
TACATATGGTGGAAACCCTGTTTGCTCTGCTGGTGGACATG
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E252629] | SGN-U583520 | Tomato 200607 | Build 2 | 12 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T67479 [Download][View] | Facility Assigned ID: TBFDA65TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.976 | Expected Error Rate: 0.0161 | Quality Trim Threshold: 14.5 |
Working
