EST details — SGN-E252540
| Search information |
| Request: 252540 | Match: SGN-E252540 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C32577 | Clone name: cLEG-20-H2 |
| ||
| Library Name: cLEG | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit pericarp
Development Stage: breaker fruit
Microarray: Alias clone SGN-C180673 is on microarray TOM1: SGN-S1-1-2.4.19.11
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C180673 [TUS-34-P15] | Trace: SGN-T187109 | EST: SGN-E375207 | Direction: 3' | Facility: INRA |
| Clone: SGN-C180673 [TUS-34-P15] | Trace: SGN-T187110 | EST: SGN-E375208 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E252540 | Length: 509 bp (1046 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E252540 [] (trimmed)
TTTTGCTATGGAGGCCTCCAGGAAATCACGTGTTGCTTTTGCAGCTGTTTATCCAGGGCCGGGAGATTCACAATGTAAAGAGGGTGCATTATCTG
TTAAGAGGGCCCTTGATTTCAACTTCCAGGATGTGGATGGATTATTGCGTCTTGTGCGGGTCGCATGNGAAGCTATCACCTAAGTGCAAGCTGTT
GTTGAAATTGTCCACTTCTTGGAACATAGTTTTGTACCTGCTCTCCATTACTGTCAGTTGAGCAAGTAAAAGCGAGGATCTCTTGGTTGGAGTTG
TGGGTGGATTTTGCTCTATCATCTCCCAAAGTTTTATCTTCTCAATGCTTCTGTACAGTAATACCTGAATTTTACTGTTTGTAAGATGTTTTAGC
AGAAGGGGAGTCTTGGGTAACGGTAAAGTTGTCTCTATGTCACATGAACTGGGTTCAAGCCAAGGAATCAATCACTGATAAGCATCANGGAAGGC
TGCCTTCAACACACCCCTTGGAGAGTGGTCCATC
TTAAGAGGGCCCTTGATTTCAACTTCCAGGATGTGGATGGATTATTGCGTCTTGTGCGGGTCGCATGNGAAGCTATCACCTAAGTGCAAGCTGTT
GTTGAAATTGTCCACTTCTTGGAACATAGTTTTGTACCTGCTCTCCATTACTGTCAGTTGAGCAAGTAAAAGCGAGGATCTCTTGGTTGGAGTTG
TGGGTGGATTTTGCTCTATCATCTCCCAAAGTTTTATCTTCTCAATGCTTCTGTACAGTAATACCTGAATTTTACTGTTTGTAAGATGTTTTAGC
AGAAGGGGAGTCTTGGGTAACGGTAAAGTTGTCTCTATGTCACATGAACTGGGTTCAAGCCAAGGAATCAATCACTGATAAGCATCANGGAAGGC
TGCCTTCAACACACCCCTTGGAGAGTGGTCCATC
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E252540] | SGN-U583790 | Tomato 200607 | Build 2 | 10 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T67390 [Download][View] | Facility Assigned ID: TBFDB37TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.984 | Expected Error Rate: 0.0217 | Quality Trim Threshold: 14.5 |
Working
