EST details — SGN-E252370
| Search information |
| Request: 252370 | Match: SGN-E252370 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C31266 | Clone name: cLEG-12-M9 |
| ||
| Library Name: cLEG | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit pericarp
Development Stage: breaker fruit
Microarray: Alias clone SGN-C185110 is on microarray TOM1: SGN-S1-1-5.1.12.19
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C185110 [TUS-46-I12] | Trace: SGN-T1868 | EST: SGN-E378472 | Direction: 5' | Facility: Giov. Lab |
| Clone: SGN-C185110 [TUS-46-I12] | Trace: SGN-T196589 | EST: SGN-E395263 | Direction: 5' | Facility: INRA |
| Clone: SGN-C185110 [TUS-46-I12] | Trace: SGN-T199000 | EST: SGN-E397674 | Direction: 3' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E252370 | Length: 500 bp (866 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E252370 [] (trimmed)
GAAAGCTTAAGAGTGGGTGATCCTACTGTTAAGCAAGTCGATCTTCAACCAGGCTCAATTGAGCTACTCCGTGTTGACTCAGCTGCAGAGGTTTG
TTGCGTTACTTTTGTTTTAAATTACAAACACGCGCTTAATCTGCAGTCCCAAAACTTGTTTAGCTATTGTGCAGTTGGATATAGAAGCCTCATTT
GAAGTGGACAAAGTCGCGCTTCAAGGAATAATTGAAGCAGATCATGTAGGTTTCAGTTGCTCTACTAGTGGAGGTGCTGCTAGCAGAGGCATTTT
GGGACCATTTGGTGTCATAGTAATTGCTGATCAAACGCTATCTGAGCTAACGCCAGTTTACTTTTACATTTCTAAAGGAGCTGATGGTCGTGCAG
AGACTCACTTCTGTGCTGATCAAACTAGGTTTGCTTTTCTATCTGGCACAATTAATTTGTCCTTGTAAAATGGAGATGGATAAAAGTAGCGGGTT
GTTGATCTGATATATGCAGATCCTC
TTGCGTTACTTTTGTTTTAAATTACAAACACGCGCTTAATCTGCAGTCCCAAAACTTGTTTAGCTATTGTGCAGTTGGATATAGAAGCCTCATTT
GAAGTGGACAAAGTCGCGCTTCAAGGAATAATTGAAGCAGATCATGTAGGTTTCAGTTGCTCTACTAGTGGAGGTGCTGCTAGCAGAGGCATTTT
GGGACCATTTGGTGTCATAGTAATTGCTGATCAAACGCTATCTGAGCTAACGCCAGTTTACTTTTACATTTCTAAAGGAGCTGATGGTCGTGCAG
AGACTCACTTCTGTGCTGATCAAACTAGGTTTGCTTTTCTATCTGGCACAATTAATTTGTCCTTGTAAAATGGAGATGGATAAAAGTAGCGGGTT
GTTGATCTGATATATGCAGATCCTC
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E252370] | SGN-U580029 | Tomato 200607 | Build 2 | 22 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T66180 [Download][View] | Facility Assigned ID: TBFBS77TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.968 | Expected Error Rate: 0.0065 | Quality Trim Threshold: 14.5 |
Working
