EST details — SGN-E251820
| Search information |
| Request: 251820 | Match: SGN-E251820 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C31643 | Clone name: cLEG-14-M13 |
| ||
| Library Name: cLEG | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit pericarp
Development Stage: breaker fruit
Microarray: Alias clone SGN-C183388 is on microarray TOM1: SGN-S1-1-7.1.1.6
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C183388 [TUS-42-A18] | Trace: SGN-T195006 | EST: SGN-E393680 | Direction: 3' | Facility: INRA |
| Clone: SGN-C183388 [TUS-42-A18] | Trace: SGN-T196003 | EST: SGN-E394677 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E251820 | Length: 576 bp (1008 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E251820 [] (trimmed)
TGTCAAGCCCACTAGAGATAGATACTTCATTTTCACATTCCAATTTGTTGTTTTTGGAAGATGAATCATCATGGAGTAATACTCATGATCCATTT
GTTGATATTGATGAATATCTACCAATAATTATACCATGTAATGATGAAGAAATAGTAGTAGAATCCTCAAACGCTAGTACTACAACAACAACAAC
AACAACATCAAAAGTAGCAAGTATCCAAAATATTCATCATGATCAAGAAGAGGTAACATCCATAGAGAAAAAACATGAAGATGATCAAGAAAAAC
ATTATATTGGAGTTAGAAAGAGGCCATGGGGTAAATATGCATCAGAAATTAGGGATTCAACGCGTAATGGAATTAGGGTTTGGTTAGGAACATTT
GATACTGCTGAAGAAGCTGCTTTAGCTTATGATCAAGCCGCATTATCAATGAGGGGTCCTTGGTCTCTACTCAATTTTCCAATGGAACATGTTAA
AAAATCTCTTGAAAATATTGAGTATTCTTGTAAAGATGGATTATCTCCAGCTGCTGTTTTAAAAGCTACTCATAAAACTAGAAGAGTCAAGCACA
AGAGAA
GTTGATATTGATGAATATCTACCAATAATTATACCATGTAATGATGAAGAAATAGTAGTAGAATCCTCAAACGCTAGTACTACAACAACAACAAC
AACAACATCAAAAGTAGCAAGTATCCAAAATATTCATCATGATCAAGAAGAGGTAACATCCATAGAGAAAAAACATGAAGATGATCAAGAAAAAC
ATTATATTGGAGTTAGAAAGAGGCCATGGGGTAAATATGCATCAGAAATTAGGGATTCAACGCGTAATGGAATTAGGGTTTGGTTAGGAACATTT
GATACTGCTGAAGAAGCTGCTTTAGCTTATGATCAAGCCGCATTATCAATGAGGGGTCCTTGGTCTCTACTCAATTTTCCAATGGAACATGTTAA
AAAATCTCTTGAAAATATTGAGTATTCTTGTAAAGATGGATTATCTCCAGCTGCTGTTTTAAAAGCTACTCATAAAACTAGAAGAGTCAAGCACA
AGAGAA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E251820] | SGN-U574873 | Tomato 200607 | Build 2 | 14 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T66477 [Download][View] | Facility Assigned ID: TBFCA79TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.934 | Expected Error Rate: 0.0055 | Quality Trim Threshold: 14.5 |
Working
