EST details — SGN-E251753
| Search information |
| Request: 251753 | Match: SGN-E251753 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C31796 | Clone name: cLEG-15-J7 |
| ||
| Library Name: cLEG | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit pericarp
Development Stage: breaker fruit
Microarray: Alias clone SGN-C180571 is on microarray TOM1: SGN-S1-1-8.4.19.10
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C180571 [TUS-34-L9] | Trace: SGN-T187169 | EST: SGN-E375267 | Direction: 3' | Facility: INRA |
| Clone: SGN-C180571 [TUS-34-L9] | Trace: SGN-T187170 | EST: SGN-E375268 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E251753 | Length: 571 bp (1000 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E251753 [] (trimmed)
GCAAAATATTCCTCATCTCTAGCAAGGTTCTTGGCAACTGATGGTGGTACCCATTGGTTTCTGCCTGGGAGAACAGTCAATGAGCAACCAGCAGC
CTCTAGTTTCTCCTTGGCTGACGTTGAAAAAGCGCGGGCTTTGAAGTTGAGTTTCACGCTTAGCTCACCATCGCCTAAGATCTGGAAATGGAGAT
ATCATAAAAAAATGTACATATAGGCGATACAACCTAAGAATCATCATAGTTGGTTATTTAATCAACTTTCGGGGAGTTGAACTTGACAGGAGGGC
TTTCAGATTCATGCATGGTTGGTCACTTGGACATTAAACCAAATTCCAGGACATAGTAGCTGCATGGGCTAAAAAAAGTTCGCTTATAATGACTT
GGGATGATATATCCAGACAATTTCTACAACCATATTCCACATCATATAAGCGGGAGAGAGAATGAAGTATGCATCGATGAGTTAGTACTAGGAAC
AGGCAACGGAAAACTTGTCAATTCATTATGAACTAGATGTTCATACACATTCNGCAATACATACTTGTCACCTTAGCAGTTTCAATCAATATTAT
A
CTCTAGTTTCTCCTTGGCTGACGTTGAAAAAGCGCGGGCTTTGAAGTTGAGTTTCACGCTTAGCTCACCATCGCCTAAGATCTGGAAATGGAGAT
ATCATAAAAAAATGTACATATAGGCGATACAACCTAAGAATCATCATAGTTGGTTATTTAATCAACTTTCGGGGAGTTGAACTTGACAGGAGGGC
TTTCAGATTCATGCATGGTTGGTCACTTGGACATTAAACCAAATTCCAGGACATAGTAGCTGCATGGGCTAAAAAAAGTTCGCTTATAATGACTT
GGGATGATATATCCAGACAATTTCTACAACCATATTCCACATCATATAAGCGGGAGAGAGAATGAAGTATGCATCGATGAGTTAGTACTAGGAAC
AGGCAACGGAAAACTTGTCAATTCATTATGAACTAGATGTTCATACACATTCNGCAATACATACTTGTCACCTTAGCAGTTTCAATCAATATTAT
A
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E251753] | SGN-U587998 | Tomato 200607 | Build 2 | 1 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T66767 [Download][View] | Facility Assigned ID: TBFCG52TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.975 | Expected Error Rate: 0.0200 | Quality Trim Threshold: 14.5 |
Working
