EST details — SGN-E251606
| Search information |
| Request: 251606 | Match: SGN-E251606 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C45876 | Clone name: cLEG-9-J4 |
| ||
| Library Name: cLEG | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit pericarp
Development Stage: breaker fruit
Microarray: Alias clone SGN-C180387 is on microarray TOM1: SGN-S1-1-8.4.19.12
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C180387 [TUS-34-D17] | Trace: SGN-T187128 | EST: SGN-E375226 | Direction: 3' | Facility: INRA |
| Clone: SGN-C180387 [TUS-34-D17] | Trace: SGN-T187129 | EST: SGN-E375227 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E251606 | Length: 623 bp (946 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E251606 [] (trimmed)
AGATGGGAGAACAGCTAATCAATTGAGACCATTGAGTTGCGCTCGTAATGTTCTTAATCGCGCTCATGGCTCTGCAAGTTGGTCTCAAGGGGAGA
CGAAAGTTCTTGCTGCTGTTTATGGACCAAAGGCTGGAACAAACAAGAACGAGAATCCAGAGAAGGCATGTTTTGAAGTCATTTGGAAGCCAAAA
ACTGGGCAGATTGGTAAAGCGGAGAAGGAGTATGAGATGATTTTGAAGAAGACCGTGCAAAGCATTTGTGTTTTGAATGTTCATCCAAATACCAC
CACGTCAATTATCATTCAGGTTGTCAACGATGATGGAGCTCTTCTTCCATGTGCCATAAATGCATTATGTGCTGCCCTTGTGGATGCTGGCATTC
CTTTGAAGCACCTTGCTGTTGCAATATGTTGTTGTCTAACAGAGAGTGGACATATTCTACTGGACCCTAGCAAGCTAGAAGAACAGAGAATGAAG
GCATTTGTATATCTAGTTTTCCCAAACTCGACATTATCTGTGCTTCCTGAAGAAGCATTGAAAGTGAGAGGTGAACCCATGGAACACGGGCTTAT
AACATCTTCTACGCATGGTGTAATGTCGGTTGACGACTACATACGCTGTTTGG
CGAAAGTTCTTGCTGCTGTTTATGGACCAAAGGCTGGAACAAACAAGAACGAGAATCCAGAGAAGGCATGTTTTGAAGTCATTTGGAAGCCAAAA
ACTGGGCAGATTGGTAAAGCGGAGAAGGAGTATGAGATGATTTTGAAGAAGACCGTGCAAAGCATTTGTGTTTTGAATGTTCATCCAAATACCAC
CACGTCAATTATCATTCAGGTTGTCAACGATGATGGAGCTCTTCTTCCATGTGCCATAAATGCATTATGTGCTGCCCTTGTGGATGCTGGCATTC
CTTTGAAGCACCTTGCTGTTGCAATATGTTGTTGTCTAACAGAGAGTGGACATATTCTACTGGACCCTAGCAAGCTAGAAGAACAGAGAATGAAG
GCATTTGTATATCTAGTTTTCCCAAACTCGACATTATCTGTGCTTCCTGAAGAAGCATTGAAAGTGAGAGGTGAACCCATGGAACACGGGCTTAT
AACATCTTCTACGCATGGTGTAATGTCGGTTGACGACTACATACGCTGTTTGG
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E251606] | SGN-U578488 | Tomato 200607 | Build 2 | 22 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T65689 [Download][View] | Facility Assigned ID: TBFBJ50TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.979 | Expected Error Rate: 0.0045 | Quality Trim Threshold: 14.5 |
Working
