EST details — SGN-E251576
| Search information |
| Request: 251576 | Match: SGN-E251576 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C45839 | Clone name: cLEG-9-H13 |
| ||
| Library Name: cLEG | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit pericarp
Development Stage: breaker fruit
Microarray: Alias clone SGN-C180385 is on microarray TOM1: SGN-S1-1-2.4.19.8
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C180385 [TUS-34-D15] | Trace: SGN-T187051 | EST: SGN-E375149 | Direction: 3' | Facility: INRA |
| Clone: SGN-C180385 [TUS-34-D15] | Trace: SGN-T187052 | EST: SGN-E375150 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E251576 | Length: 485 bp (1037 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E251576 [] (trimmed)
ATGGGAAAGTTTCGATCAAAACAGAGTGCAGAGCAAACGAAGAAGGACGAAAACACATAGAAAAACTGGATCTGGATACTAAAAACGTCGATACT
GTTAAGTATGTCGAAAAAAAGTTGACGGAAAAAGGGGTGCAGAGGTTGGAACGGCATCCATCGGATGGGCTGCCGTTAAAGCATGATCCGAAGAA
AGGACACGGAGGTAAGTATACATGGGAAGGACCTGATAAGTATAATGCGGATGAGAGAGATCTGAATCATAATGTGAATGAAGAAGCAGAGGATG
ATGAAGGAGGAGTTATTGTGGGTGAAATTGAAGTAGCAAAATTGGCTGAAGAAGGTGTTGCTAGAATTGAAATTGATCCTAATTTGAAAATTGAT
TAATCATTTCTTACCTCTTGTGATTTTAGGGGGAAAAATAATTGTTGAATTTGTGTTTGTTAATTACTTGTATGTGATGGAATAATAACTGAACT
TTTTCTTCAT
GTTAAGTATGTCGAAAAAAAGTTGACGGAAAAAGGGGTGCAGAGGTTGGAACGGCATCCATCGGATGGGCTGCCGTTAAAGCATGATCCGAAGAA
AGGACACGGAGGTAAGTATACATGGGAAGGACCTGATAAGTATAATGCGGATGAGAGAGATCTGAATCATAATGTGAATGAAGAAGCAGAGGATG
ATGAAGGAGGAGTTATTGTGGGTGAAATTGAAGTAGCAAAATTGGCTGAAGAAGGTGTTGCTAGAATTGAAATTGATCCTAATTTGAAAATTGAT
TAATCATTTCTTACCTCTTGTGATTTTAGGGGGAAAAATAATTGTTGAATTTGTGTTTGTTAATTACTTGTATGTGATGGAATAATAACTGAACT
TTTTCTTCAT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E251576] | SGN-U562807 | Tomato 200607 | Build 2 | 6 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T65659 [Download][View] | Facility Assigned ID: TBFBI43TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.914 | Expected Error Rate: 0.0020 | Quality Trim Threshold: 12.5 |
Working
