EST details — SGN-E250184
| Search information |
| Request: 250184 | Match: SGN-E250184 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C31015 | Clone name: cLEG-11-H11 |
| ||
| Library Name: cLEG | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit pericarp
Development Stage: breaker fruit
Microarray: Alias clone SGN-C184561 is on microarray TOM1: SGN-S1-1-2.2.14.11
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C184561 [TUS-45-B15] | Trace: SGN-T198647 | EST: SGN-E397321 | Direction: 3' | Facility: INRA |
| Clone: SGN-C184561 [TUS-45-B15] | Trace: SGN-T198648 | EST: SGN-E397322 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E250184 | Length: 664 bp (887 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E250184 [] (trimmed)
TGTATTGTAGGATCCATGGTTGGTTTTGGTCTTGTTTATGGGGGAACTGGTGCAGTCTTTTGGAGTTCACTGGCAAGGGTAATTTCCTCATGGGT
TATCTCACCTTTACTGGGAGCAGTGGTGTCCTTTCTCGTGTACAAATGCATACGGAGGTTTGTGTACAGTGCTCGGAACCCAGGAAAAGCGGCTG
CAACAGCTGCACCAATTTCTGTCTTTCTTGGTGTCACTGGAATCTCTTTCGTAGCTCTCCCTTTGAGCAAGACTTTGAATCTAGCTCTTGGCCAG
GCTATAACTTGTGGCGCCATTAGTGCATTTGCAGTTGACAGGATCATCCGGGGCCAACTTGGCCACCTCCTGGCCAAGGCCAGTTCAAAAGAACC
AGAAACTACTGACACTAAAAACATTGGATTTCTTTCAGACATTGCAGGTCCTAAAGGAACACAACTGAAAATAGTTTATGGCGTTTTTGGCTATA
TGCAAGTCTTATCAGCCTGCTTCATGTCATTTGCTCATGGTGGAAATGATGTCTCCAATGCAATAGGGCCATTGGCTGCAGCATTATCCATTCTT
CAAGGTGGGCTCAGTGCAGCTGATATTGTTATTCCAAATGATGTTCTAGCATGGGGAGGCTTTGGAATTGTGGCAGGACTAACAATGTGGGGAT
TATCTCACCTTTACTGGGAGCAGTGGTGTCCTTTCTCGTGTACAAATGCATACGGAGGTTTGTGTACAGTGCTCGGAACCCAGGAAAAGCGGCTG
CAACAGCTGCACCAATTTCTGTCTTTCTTGGTGTCACTGGAATCTCTTTCGTAGCTCTCCCTTTGAGCAAGACTTTGAATCTAGCTCTTGGCCAG
GCTATAACTTGTGGCGCCATTAGTGCATTTGCAGTTGACAGGATCATCCGGGGCCAACTTGGCCACCTCCTGGCCAAGGCCAGTTCAAAAGAACC
AGAAACTACTGACACTAAAAACATTGGATTTCTTTCAGACATTGCAGGTCCTAAAGGAACACAACTGAAAATAGTTTATGGCGTTTTTGGCTATA
TGCAAGTCTTATCAGCCTGCTTCATGTCATTTGCTCATGGTGGAAATGATGTCTCCAATGCAATAGGGCCATTGGCTGCAGCATTATCCATTCTT
CAAGGTGGGCTCAGTGCAGCTGATATTGTTATTCCAAATGATGTTCTAGCATGGGGAGGCTTTGGAATTGTGGCAGGACTAACAATGTGGGGAT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E250184] | SGN-U565824 | Tomato 200607 | Build 2 | 9 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T65967 [Download][View] | Facility Assigned ID: TBFBQ42TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.964 | Expected Error Rate: 0.0058 | Quality Trim Threshold: 14.5 |
Working
