EST details — SGN-E249253
| Search information |
| Request: 249253 | Match: SGN-E249253 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C29078 | Clone name: cLEF-50-B22 |
| ||
| Library Name: cLEF | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit pericarp
Development Stage: mature green
Microarray: Alias clone SGN-C180400 is on microarray TOM1: SGN-S1-1-3.1.19.5
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C180400 [TUS-34-E6] | Trace: SGN-T1623 | EST: SGN-E378196 | Direction: 5' | Facility: Giov. Lab |
| Clone: SGN-C180400 [TUS-34-E6] | Trace: SGN-T193771 | EST: SGN-E392445 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E249253 | Length: 598 bp (975 bp untrimmed) |
| Status: Current Version | Direction: 5' |
>SGN-E249253 [] (trimmed)
GAGGTTACCAGTTCAAGTCCCGTTTCCGGCAACTTTTCCGGTTATTAAGCTGTTCCGCCGCTGAGCACACTGATTTAACTTCAGATTTACCCAAT
ACAGAGGTGATTGAAAGCTATGGCTTCCAAGGTATCCATCATTTCAAAATGGACGGTTAAAGCTGAGGGAAAAAGTCAGCACCATACAGATAATT
GTAAGATTATTGAGTTGACACCATGGGACATTCTTGAGCTTCAAATTGACTACTTTCAAACTGGACTCCTCTTCCTCATGCCTGCATTTGAACAA
GTAAGAGATCTACTAAAAACAACCAACACCAGTTCCTTAATTGATCATCTTAGAGTTTCACTATCTCGAGCTTTAGAGCCTGTTTGGCTCAGCTT
AAAAGCTGGTCAAACTGACTTAAAAGCTGGTTTTTGACTTATTTAAATGTTTGGCAATACTCAAAATAGCTTATTTTAAGTTAAAAAAACTTATT
TTAAGCCAAAAGTGTGCCTTTTTTTTTTAGCTTATAAGCTGTTTTAAGTTGACCATATTTTTATGTTTTTTCCCTTAATATTTTTATACAATCTC
CAAATTACCCATATAACACTAACTTCTC
ACAGAGGTGATTGAAAGCTATGGCTTCCAAGGTATCCATCATTTCAAAATGGACGGTTAAAGCTGAGGGAAAAAGTCAGCACCATACAGATAATT
GTAAGATTATTGAGTTGACACCATGGGACATTCTTGAGCTTCAAATTGACTACTTTCAAACTGGACTCCTCTTCCTCATGCCTGCATTTGAACAA
GTAAGAGATCTACTAAAAACAACCAACACCAGTTCCTTAATTGATCATCTTAGAGTTTCACTATCTCGAGCTTTAGAGCCTGTTTGGCTCAGCTT
AAAAGCTGGTCAAACTGACTTAAAAGCTGGTTTTTGACTTATTTAAATGTTTGGCAATACTCAAAATAGCTTATTTTAAGTTAAAAAAACTTATT
TTAAGCCAAAAGTGTGCCTTTTTTTTTTAGCTTATAAGCTGTTTTAAGTTGACCATATTTTTATGTTTTTTCCCTTAATATTTTTATACAATCTC
CAAATTACCCATATAACACTAACTTCTC
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E249253] | SGN-U581581 | Tomato 200607 | Build 2 | 2 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T62761 [Download][View] | Facility Assigned ID: TMGHR11TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.950 | Expected Error Rate: 0.0077 | Quality Trim Threshold: 14.5 |
Working
