EST details — SGN-E249105
| Search information |
| Request: 249105 | Match: SGN-E249105 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C29045 | Clone name: cLEF-49-P7 |
| ||
| Library Name: cLEF | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit pericarp
Development Stage: mature green
Microarray: Alias clone SGN-C177129 is on microarray TOM1: SGN-S1-1-2.4.8.11
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C177129 [TUS-25-L23] | Trace: SGN-T182004 | EST: SGN-E369051 | Direction: 3' | Facility: INRA |
| Clone: SGN-C177129 [TUS-25-L23] | Trace: SGN-T182005 | EST: SGN-E369052 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E249105 | Length: 519 bp (901 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E249105 [] (trimmed)
TATGAATATGGCAAATTCAGCCGCCACCATGGCAGGTGAAGGAACTGCCAACGCCAGTCAGAGGAAATTACCCAGATTTTTGTGCCTTCATGGGT
TTCGAACAAGTGGGAAAATTTTGAAGAAGCAAATATTTGATAAATGGCCAACTGAAGTTGTGGATAAATTAGATCTAGTTTTTGTTGATGCGCCT
TTTCCATCTCGAGGCAAATCTGAAGTTGAAGGCATATTTGCCCCTCCTTATTATGAATGGTACCAGTTCAATAAGGAATTGAATGAGTATGAGAA
TTTTGATAACTGTCTTGATTATATACAAGAGTGTATGATTAAGCACGGACCTTTCGATGGTCTTCTTGGTTTCTCCCAGGGGGCAATTCTTTCTG
GAGCATTGCGTGGATTGCAGGATAAGGGAGTGGGACTTACTAAGGTTCGCAAAATTAAATATCTGATCATAATTGGAGGTGCGAAAATGCAGATT
AAATCACTGGCCGAAAAAGCTTATTCACCAGCAATTACATGCCC
TTCGAACAAGTGGGAAAATTTTGAAGAAGCAAATATTTGATAAATGGCCAACTGAAGTTGTGGATAAATTAGATCTAGTTTTTGTTGATGCGCCT
TTTCCATCTCGAGGCAAATCTGAAGTTGAAGGCATATTTGCCCCTCCTTATTATGAATGGTACCAGTTCAATAAGGAATTGAATGAGTATGAGAA
TTTTGATAACTGTCTTGATTATATACAAGAGTGTATGATTAAGCACGGACCTTTCGATGGTCTTCTTGGTTTCTCCCAGGGGGCAATTCTTTCTG
GAGCATTGCGTGGATTGCAGGATAAGGGAGTGGGACTTACTAAGGTTCGCAAAATTAAATATCTGATCATAATTGGAGGTGCGAAAATGCAGATT
AAATCACTGGCCGAAAAAGCTTATTCACCAGCAATTACATGCCC
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E249105] | SGN-U564820 | Tomato 200607 | Build 2 | 6 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T62613 [Download][View] | Facility Assigned ID: TMGHM88TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.965 | Expected Error Rate: 0.0068 | Quality Trim Threshold: 14.5 |
Working
