EST details — SGN-E249062
| Search information |
| Request: 249062 | Match: SGN-E249062 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C29017 | Clone name: cLEF-49-O20 |
| ||
| Library Name: cLEF | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit pericarp
Development Stage: mature green
Microarray: Alias clone SGN-C177113 is on microarray TOM1: SGN-S1-1-2.4.8.3
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C177113 [TUS-25-L7] | Trace: SGN-T181919 | EST: SGN-E368966 | Direction: 3' | Facility: INRA |
| Clone: SGN-C177113 [TUS-25-L7] | Trace: SGN-T181920 | EST: SGN-E368967 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E249062 | Length: 548 bp (906 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E249062 [] (trimmed)
CGAGTGAAAGTGGATATGGTAATGATGGTTATGGCGATGGGGTGTTTGCTTATCAGGGTAGTAAAGTAGAGCCTTATGGGGCACGAGGGACTGGT
TCAAAGTCTTCGACTTGGTCGTCTAGTTTTGATGATTTTGGGAGGCCAATTGGGTATAATTCTCCGAAAGAACGTTCATCAGCTCCAACTGCAAA
GATCGTCAAGGCAATTCCCAAGGTTGATACGCAGCAGGATGCGAAAAGTGGTGTTCAGAAGTTTAGGGTGAAGTTATTAGCTGAAAGTGGTGGAC
AGAGTACCCAGGATGTTCTTTGCCAGATTGGCTTGGATGGAATCCGCATGTTGGACCCAAGCACTAGCCGGATGTTAAGAATTTATCCTCTTGAC
ACGGTAACTAGACTTGAGGCGACGGATTCATCTACCTTTGCCTTCTGGTCAAAAAGTGCAGTGGATATAGAACCAAGGCGTATCAGACTGCAGTC
GAACAGTTACACAACCAGTTCCCTGTTAGATACAGTCACGGCTGCGGTTGTACAGTTCAAGGAGATGGGTGGA
TCAAAGTCTTCGACTTGGTCGTCTAGTTTTGATGATTTTGGGAGGCCAATTGGGTATAATTCTCCGAAAGAACGTTCATCAGCTCCAACTGCAAA
GATCGTCAAGGCAATTCCCAAGGTTGATACGCAGCAGGATGCGAAAAGTGGTGTTCAGAAGTTTAGGGTGAAGTTATTAGCTGAAAGTGGTGGAC
AGAGTACCCAGGATGTTCTTTGCCAGATTGGCTTGGATGGAATCCGCATGTTGGACCCAAGCACTAGCCGGATGTTAAGAATTTATCCTCTTGAC
ACGGTAACTAGACTTGAGGCGACGGATTCATCTACCTTTGCCTTCTGGTCAAAAAGTGCAGTGGATATAGAACCAAGGCGTATCAGACTGCAGTC
GAACAGTTACACAACCAGTTCCCTGTTAGATACAGTCACGGCTGCGGTTGTACAGTTCAAGGAGATGGGTGGA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E249062] | SGN-U566354 | Tomato 200607 | Build 2 | 19 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T62570 [Download][View] | Facility Assigned ID: TMGHL94TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.985 | Expected Error Rate: 0.0092 | Quality Trim Threshold: 14.5 |
Working
